Homologs in group_3726

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS15280 PMI_RS15280 28.1 Proteus mirabilis HI4320 - fimbria/pilus outer membrane usher protein

Distribution of the homologs in the orthogroup group_3726

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3726

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42915 1.8e-19 97 23 19 596 2 yraJ Outer membrane usher protein YraJ Escherichia coli (strain K12)
P33388 7.89e-13 75 21 21 615 3 sefC Outer membrane usher protein SefC Salmonella enteritidis
P15484 1.86e-12 74 22 19 583 3 None Outer membrane usher protein CS3-2 Escherichia coli
P45998 2.47e-12 74 24 27 637 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P33397 5.16e-12 73 23 27 641 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P45997 1.77e-11 71 23 26 639 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P43662 1.95e-11 71 21 21 629 3 lpfC Outer membrane usher protein LpfC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7DBJ9 1.5e-10 67 23 10 297 4 ydeT Fimbrial usher domain-containing protein YdeT Escherichia coli O157:H7
P53517 1.94e-10 68 20 23 626 3 afaC Outer membrane usher protein AfaC Escherichia coli
P53512 3.49e-10 67 27 2 195 3 cssD Outer membrane usher protein CssD Escherichia coli
P76137 7.7e-10 65 23 10 304 4 ydeT Fimbrial usher domain-containing protein YdeT Escherichia coli (strain K12)
P53513 1.93e-09 65 26 2 195 3 cssD Outer membrane usher protein CssD Escherichia coli
P33408 2.95e-09 64 20 22 624 3 myfC Outer membrane usher protein MyfC Yersinia enterocolitica
P77468 4.13e-08 60 21 34 820 2 sfmD Outer membrane usher protein SfmD Escherichia coli (strain K12)
P33410 5.68e-08 60 22 22 655 3 fimC Outer membrane usher protein FimC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P77196 1.55e-07 58 23 8 265 5 yfcU Putative outer membrane usher protein YfcU Escherichia coli (strain K12)
P46005 2.74e-07 58 20 24 627 3 aggC Outer membrane usher protein AggC Escherichia coli
P06970 4.97e-07 57 25 12 330 3 faeD Outer membrane usher protein FaeD Escherichia coli
P21647 7.8e-07 56 28 2 125 3 mrkC Outer membrane usher protein MrkC Klebsiella pneumoniae
Q56983 1.27e-06 55 22 9 342 3 psaC Outer membrane usher protein PsaC Yersinia pseudotuberculosis serotype I (strain IP32953)
P31527 1.27e-06 55 22 9 342 3 psaC Outer membrane usher protein PsaC Yersinia pestis
P75857 2.05e-06 55 28 4 142 2 elfC Probable outer membrane usher protein ElfC Escherichia coli (strain K12)
P12050 2.93e-06 54 21 19 533 3 fanD Outer membrane usher protein FanD Escherichia coli
P26949 4.82e-06 53 32 1 112 1 caf1A F1 capsule-anchoring protein Yersinia pestis
Q8XDD1 8.08e-06 53 28 4 142 2 elfC Probable outer membrane usher protein ElfC Escherichia coli O157:H7
P53514 1.73e-05 52 25 3 161 3 pmfC Outer membrane usher protein PmfC Proteus mirabilis (strain HI4320)
P30130 2.32e-05 52 21 11 321 1 fimD Outer membrane usher protein FimD Escherichia coli (strain K12)
P33341 3.4e-05 51 19 18 623 2 yehB Outer membrane usher protein YehB Escherichia coli (strain K12)
P07110 0.000187 48 25 1 122 1 papC Outer membrane usher protein PapC Escherichia coli
P37924 0.000189 48 24 6 201 3 fimD Outer membrane usher protein FimD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06000
Feature type CDS
Gene -
Product fimbria/pilus outer membrane usher protein
Location 1272239 - 1274554 (strand: 1)
Length 2316 (nucleotides) / 771 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3726
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00577 Outer membrane usher protein
PF13953 PapC C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3188 Cell motility (N)
Extracellular structures (W)		 NW Outer membrane usher protein FimD/PapC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07347 outer membrane usher protein Two-component system
Pertussis		 -

Protein Sequence

MNIQNLRISLFILISTALYTTGGFAAPATELLYLDVSVNKRAIPDLIPVRKEGDTFWLSEEESQSLNLNTETLPKQDGWIKLTPQPGFTFNYDPLTQSLAITAESSRLAGHQNKSSPEQGFLLKEDQIAPAIKGGVINYDLFASQDKYTDSASAYTELRAFGYGQGNFSSSFNTRISRTNDITDNTFTRLMTSWTYSNVDSLNVLTLGDSITGGQSGTNRVRFGGIRFSHNYTVQPNFNTASQPIYSSTAVLPSTVDLYIEGMKNSTQRVEPGQFTLNTAPYFSGAGNAQLVITDINGQQQKIDLSLYNTNQLLSPGLYTWDISTGWLRDGYSDRSFSYDPRLMVVGDGRYGLSNKITLAAHSEINSALQNTGAGYHWLISPYLGVFRTDAALSRYRNNNGSQWGTGWQWNNPQFNISADHQQFSGNYADMSVMAGNTLPKTSDSVFISQAFDNIGTLGSGWVTRQYPSAKVQYANISWTRTWDNSFTLSVNATKELTNQNDHALYLMLNIPLSSEHYVSLQTSYEDQRVNQQIQYQKSLVPDKTGWGWGLSSLTGHNNSLHADISRRNEINEWQLGYNRNNSQDSWFAGSNGAIGLLDGQFYFMRTLGNAFAIADTSGIPEIPVYLQNVEVGKTDENGFLLLNDLYGYEPQKIRINALSLPADYRIRDTEKNVILRDGSGTRVTFNVYQTRALLLKLTQKGGQPMPFAATVTTENNTQKTIVGYDSRIYLESWAPGETINVTWPEGQCHIQIPDIKQSTAAFTEENAICL

Flanking regions ( +/- flanking 50bp)

GCCTATACCGGGCAACCTGTCATCAGGACAGACACTGAAAGTGACTATTAATGAACATTCAGAACCTCAGAATTTCGTTATTCATTCTGATTAGTACCGCCTTGTATACCACAGGTGGATTTGCGGCACCTGCAACAGAACTGCTTTATCTTGATGTTTCAGTTAATAAACGGGCAATACCGGATCTTATCCCGGTAAGAAAAGAAGGTGATACTTTTTGGCTGTCAGAGGAAGAAAGCCAGTCTCTGAACTTAAACACAGAAACATTACCCAAACAGGATGGCTGGATAAAACTAACGCCACAGCCCGGATTTACATTTAATTATGATCCTCTGACACAATCCCTCGCTATTACAGCCGAAAGCAGCCGGCTTGCCGGGCATCAGAATAAATCCTCCCCGGAACAGGGCTTTTTACTGAAAGAAGACCAGATAGCCCCGGCAATTAAAGGCGGGGTCATTAACTATGACCTGTTTGCCAGTCAGGATAAATACACAGACAGTGCCAGTGCATATACTGAACTGCGGGCATTTGGTTATGGTCAGGGAAATTTTTCATCATCATTTAATACCCGGATTTCCCGCACAAATGACATAACAGATAATACCTTTACCCGGCTGATGACATCCTGGACATACAGTAATGTTGATTCTTTAAATGTACTGACACTCGGAGACAGCATTACCGGCGGACAATCAGGGACCAACAGAGTCCGGTTCGGTGGTATCCGGTTTTCACATAACTACACCGTTCAACCTAATTTTAATACTGCATCACAACCTATTTACAGCAGTACCGCCGTATTGCCCTCGACGGTTGATTTATATATCGAGGGCATGAAAAACAGCACACAACGGGTTGAGCCGGGACAATTCACATTAAATACCGCACCCTATTTCTCCGGTGCCGGTAATGCGCAGCTTGTCATTACCGATATTAACGGACAGCAGCAGAAAATTGATTTATCGCTTTATAACACTAATCAATTATTATCCCCCGGGCTGTATACATGGGATATAAGCACCGGCTGGCTGCGTGATGGTTACAGTGACCGCTCTTTCAGCTACGACCCCCGGTTAATGGTTGTCGGTGACGGACGCTACGGATTAAGTAATAAAATTACACTGGCTGCACACAGTGAAATAAACAGTGCACTTCAGAATACAGGAGCTGGCTATCACTGGCTTATCTCACCTTATCTTGGCGTATTCCGGACTGATGCGGCACTGAGCCGTTACCGGAATAATAACGGGTCACAATGGGGTACCGGATGGCAATGGAATAATCCTCAGTTCAATATATCGGCTGATCATCAGCAATTCAGCGGTAATTATGCGGATATGTCGGTAATGGCAGGTAATACGCTGCCGAAAACATCTGACAGTGTATTTATCAGTCAGGCATTTGACAATATAGGAACACTTGGCAGCGGATGGGTAACCAGACAATATCCGTCTGCAAAAGTGCAGTATGCGAATATCTCCTGGACTCGGACATGGGATAATTCATTTACATTATCAGTCAATGCAACCAAAGAACTGACAAATCAGAATGATCATGCCTTATATCTTATGCTTAATATTCCCTTATCTTCTGAGCATTATGTATCGCTTCAGACCAGCTATGAAGATCAGCGCGTTAACCAACAAATTCAATACCAGAAAAGTCTGGTACCGGACAAAACAGGTTGGGGATGGGGATTATCATCCCTGACAGGTCATAATAATAGTCTTCATGCCGATATCAGCCGCCGTAATGAAATAAACGAATGGCAGCTTGGTTATAACCGTAATAACAGTCAGGACAGCTGGTTTGCCGGCAGTAATGGAGCGATAGGTCTTCTGGATGGTCAATTTTATTTTATGCGGACGCTGGGAAATGCATTCGCAATTGCTGACACATCCGGAATACCGGAGATCCCGGTCTATCTGCAAAATGTTGAGGTGGGTAAAACAGATGAAAACGGATTTTTACTACTTAATGACCTGTATGGATATGAACCACAAAAAATAAGAATTAATGCTTTGTCACTTCCTGCCGATTATCGTATCAGAGACACTGAAAAAAACGTGATATTAAGAGATGGCAGCGGAACCAGAGTAACCTTTAATGTATACCAAACACGGGCCTTGTTGCTGAAATTGACACAAAAAGGCGGGCAACCTATGCCCTTTGCAGCAACAGTGACAACAGAAAATAACACACAAAAAACAATTGTCGGGTATGACAGCCGGATTTACCTGGAATCATGGGCTCCCGGAGAAACAATTAATGTGACCTGGCCGGAAGGTCAATGTCATATTCAGATACCGGACATAAAACAAAGCACCGCAGCCTTTACTGAGGAAAATGCAATATGCTTGTAAATAATAACTATTTGATTTTCATTGGTATATTCTTCCTGTCTCCGACTGCA