Homologs in group_957

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05250 FBDBKF_05250 86.4 Morganella morganii S1 yciY YciY family protein
EHELCC_12340 EHELCC_12340 86.4 Morganella morganii S2 yciY YciY family protein
NLDBIP_12680 NLDBIP_12680 86.4 Morganella morganii S4 yciY YciY family protein
LHKJJB_12540 LHKJJB_12540 86.4 Morganella morganii S3 yciY YciY family protein
HKOGLL_11155 HKOGLL_11155 86.4 Morganella morganii S5 yciY YciY family protein
PMI_RS06545 PMI_RS06545 67.2 Proteus mirabilis HI4320 - YciY family protein

Distribution of the homologs in the orthogroup group_957

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_957

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q1RCI6 1.63e-15 65 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli (strain UTI89 / UPEC)
A5A613 1.63e-15 65 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli (strain K12)
Q8FHW7 1.63e-15 65 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TIC1 1.63e-15 65 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AAH4 1.63e-15 65 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O1:K1 / APEC

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05705
Feature type CDS
Gene -
Product YciY family protein
Location 1212931 - 1213110 (strand: -1)
Length 180 (nucleotides) / 59 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_957
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Protein Sequence

MRHSRPEVARWRMLRQVTRRRRRWLESQSRRNLRIFSLRKLDIAGQRRSLLFAHTRFSH

Flanking regions ( +/- flanking 50bp)

CTGAAGTTTGAATGAATAAGGGTATACACACTGTTTAAAAGGGTTTAGTTATGAGGCACAGCAGGCCGGAAGTTGCACGTTGGCGGATGTTAAGACAGGTAACCCGTCGTCGTCGTCGCTGGTTAGAAAGTCAGTCCCGCCGGAATCTGCGGATTTTTTCACTGCGAAAACTGGATATTGCAGGACAACGTCGTTCACTGCTGTTTGCACATACGCGTTTTAGTCATTAAAGAGTGACATTTCGCACGACAAGTGACAATGGTTATGTTTTTCTTATTGA