Homologs in group_1026

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05250 FBDBKF_05250 100.0 Morganella morganii S1 yciY YciY family protein
NLDBIP_12680 NLDBIP_12680 100.0 Morganella morganii S4 yciY YciY family protein
LHKJJB_12540 LHKJJB_12540 100.0 Morganella morganii S3 yciY YciY family protein
HKOGLL_11155 HKOGLL_11155 100.0 Morganella morganii S5 yciY YciY family protein
F4V73_RS05705 F4V73_RS05705 86.4 Morganella psychrotolerans - YciY family protein
PMI_RS06545 PMI_RS06545 72.4 Proteus mirabilis HI4320 - YciY family protein

Distribution of the homologs in the orthogroup group_1026

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1026

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q1RCI6 3.71e-16 67 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli (strain UTI89 / UPEC)
A5A613 3.71e-16 67 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli (strain K12)
Q8FHW7 3.71e-16 67 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TIC1 3.71e-16 67 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AAH4 3.71e-16 67 64 0 53 3 yciY Uncharacterized protein YciY Escherichia coli O1:K1 / APEC

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_12340
Feature type CDS
Gene yciY
Product YciY family protein
Location 124922 - 125101 (strand: 1)
Length 180 (nucleotides) / 59 (amino acids)
In genomic island -

Contig

Accession ZDB_221
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1026
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MRHSRPEVARWRMLRQATRRRRRWLESQSRRNIRIFALRKLDIARQRRSLLFAQAELSH

Flanking regions ( +/- flanking 50bp)

GCCCTTATTATTAGCTTATTTTTTCACACAGTCTAAAAAAGGGTTTAGTTATGAGACACAGCAGACCGGAAGTTGCACGTTGGCGTATGTTACGGCAGGCAACCCGTCGTCGTCGTCGCTGGCTGGAAAGTCAGTCCCGGCGGAACATCCGGATTTTTGCTCTGCGCAAGCTGGATATCGCGAGACAACGCCGTTCGCTGCTGTTTGCTCAGGCTGAATTAAGCCACTAAGAAGTGACCATCAGCACGATAAGTGACAATGGTTGTGTCTTTCGTATTGA