Homologs in group_2578

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02835 FBDBKF_02835 91.3 Morganella morganii S1 azlD2 Branched-chain amino acid transport protein
EHELCC_03305 EHELCC_03305 91.3 Morganella morganii S2 azlD2 Branched-chain amino acid transport protein
NLDBIP_00155 NLDBIP_00155 91.3 Morganella morganii S4 azlD2 Branched-chain amino acid transport protein
LHKJJB_01880 LHKJJB_01880 91.3 Morganella morganii S3 azlD2 Branched-chain amino acid transport protein
HKOGLL_01920 HKOGLL_01920 91.3 Morganella morganii S5 azlD2 Branched-chain amino acid transport protein

Distribution of the homologs in the orthogroup group_2578

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2578

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05275
Feature type CDS
Gene -
Product AzlD domain-containing protein
Location 1122324 - 1122635 (strand: 1)
Length 312 (nucleotides) / 103 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2578
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05437 Branched-chain amino acid transport protein (AzlD)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4392 Amino acid transport and metabolism (E) E Branched-chain amino acid transport protein

Protein Sequence

MSWGLILTLTVMFFSLRFIFLIPGLPLRLPVFVQQALTYSAPCLLVAICAPIVLLEEQQFREISDNPYLWGTLFCIISARLIKNTLLTVVLTLVFFYSLIYLF

Flanking regions ( +/- flanking 50bp)

AGCGCCATGCTGATTGCTGTCTTCCTGGGTCGTAAATGGGGGGATGTAAAATGAGCTGGGGATTAATTCTGACACTGACAGTGATGTTTTTTTCACTGCGCTTTATTTTTCTGATCCCGGGGCTGCCGCTGCGTCTGCCCGTCTTTGTGCAACAGGCACTGACTTACTCTGCGCCCTGCCTGCTGGTGGCTATTTGTGCGCCAATTGTATTATTGGAAGAGCAACAATTCCGGGAGATAAGTGATAATCCGTATTTATGGGGAACACTGTTTTGCATAATATCTGCGCGATTAATTAAAAATACCTTGCTGACAGTTGTTCTGACACTGGTTTTTTTCTATTCACTGATTTATCTGTTTTAATTATACTCGTCATACTTCAGCACCGGATAAAAACCGGTGCTGAACAAATA