Homologs in group_675

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02460 FBDBKF_02460 91.5 Morganella morganii S1 gLY1 Threonine aldolase
EHELCC_02930 EHELCC_02930 91.5 Morganella morganii S2 gLY1 Threonine aldolase
NLDBIP_00530 NLDBIP_00530 91.5 Morganella morganii S4 gLY1 Threonine aldolase
LHKJJB_01505 LHKJJB_01505 91.5 Morganella morganii S3 gLY1 Threonine aldolase
HKOGLL_01545 HKOGLL_01545 91.5 Morganella morganii S5 gLY1 Threonine aldolase
PMI_RS06130 PMI_RS06130 80.9 Proteus mirabilis HI4320 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of the homologs in the orthogroup group_675

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_675

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O50584 1.39e-40 148 30 7 328 1 ltaE Low specificity L-threonine aldolase Pseudomonas sp. (strain NCIMB 10558)
Q9HTF1 9.79e-37 138 30 5 320 3 ltaE Low specificity L-threonine aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O74267 1.42e-12 71 25 7 239 3 GLY1 Low-specificity L-threonine aldolase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
P37303 1.06e-11 68 25 8 265 1 GLY1 Low specificity L-threonine aldolase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O13427 2.4e-09 61 21 11 350 3 GLY1 Low-specificity L-threonine aldolase Candida albicans
O07051 2.84e-09 61 27 13 320 1 ltaA L-allo-threonine aldolase Aeromonas jandaei
O13940 1.1e-06 53 24 7 235 3 gly1 Probable low-specificity L-threonine aldolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q21890 3.96e-05 48 23 7 217 3 R102.4 Uncharacterized protein R102.4 Caenorhabditis elegans

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04835
Feature type CDS
Gene -
Product aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Location 1027532 - 1028557 (strand: 1)
Length 1026 (nucleotides) / 341 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_675
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01212 Beta-eliminating lyase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2008 Amino acid transport and metabolism (E) E Threonine aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MYRFQNDYNEVAHPAVLKEIIDTAGHRHDGYGMDSLCNRAAELIKQRIGRPQADVHFFNGGTITNLTAISHFLRPHQAVISVSTGHIATHETGAIEATGHKVITISSPDGKLTPDHLKPIVAQHNDEHWVQPKLVYITNSTEIGTVYRKAELQALRQFCDEHSLWLYLDGARLASGLMSDVSDITIEDVAALTDAFYIGGTKIGAIAAEALVINNPALKDDFRFSIKQKGGLQAKGWLLGAQFLALFTDDLYFTLGRHLNNMAGQLSAFFTEQGFTFLAPPESNQVFVILPVTLAEKLKKQFVFHETLLAEPGKSCLRLCTSWATTQHDIDDFKKTFLSLM

Flanking regions ( +/- flanking 50bp)

CTGGTAAGCACAAACTGATTTATCAGGGATAACATAACCGGAGGAAATACATGTACCGTTTTCAGAATGATTATAATGAAGTGGCTCATCCCGCTGTTTTAAAAGAGATAATTGACACTGCAGGGCATCGCCACGACGGCTACGGGATGGATTCACTGTGCAACCGTGCAGCTGAACTGATTAAACAGCGGATCGGTCGTCCGCAGGCAGACGTGCATTTTTTCAACGGCGGCACCATCACAAACCTGACCGCTATCTCTCACTTTCTGCGTCCGCATCAGGCGGTTATCTCTGTCAGCACAGGGCATATTGCGACACATGAAACCGGCGCGATTGAAGCAACCGGGCACAAAGTTATCACTATCTCTTCCCCTGACGGAAAATTGACCCCCGATCATCTGAAACCGATAGTTGCACAACATAATGATGAACACTGGGTACAGCCAAAACTGGTCTATATCACGAACTCCACAGAAATCGGTACAGTTTACCGCAAAGCCGAGCTACAGGCGCTGCGCCAATTCTGTGATGAACACAGTTTGTGGCTCTACCTGGATGGCGCACGTCTGGCATCCGGTCTGATGTCTGACGTGAGCGATATCACAATTGAAGATGTTGCCGCGCTGACAGACGCATTTTACATCGGCGGAACTAAAATCGGTGCTATTGCCGCAGAAGCGCTGGTGATTAATAATCCTGCACTGAAAGATGATTTCCGCTTCAGTATCAAGCAAAAGGGTGGCTTACAGGCAAAAGGCTGGTTACTCGGAGCGCAATTCCTCGCATTGTTTACCGATGACCTCTATTTCACATTAGGCCGTCATCTGAATAATATGGCAGGGCAGTTATCTGCATTCTTTACAGAACAGGGTTTCACCTTTCTGGCACCACCGGAGTCCAATCAGGTATTTGTGATCCTGCCTGTGACACTGGCCGAAAAACTGAAAAAACAGTTTGTATTCCATGAAACATTGCTTGCTGAACCGGGTAAATCCTGTTTGCGTCTGTGTACTTCATGGGCGACGACACAACATGATATCGATGATTTTAAAAAGACATTTTTATCTTTGATGTAAGCTATATTCAGACTCTTATTGATACCGCCCGGCAGATAACGTCGGGCGGT