Homologs in group_674

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02440 FBDBKF_02440 87.4 Morganella morganii S1 yfdV putative permease, AEC (auxin efflux carrier) family
EHELCC_02910 EHELCC_02910 87.4 Morganella morganii S2 yfdV putative permease, AEC (auxin efflux carrier) family
NLDBIP_00550 NLDBIP_00550 87.4 Morganella morganii S4 yfdV putative permease, AEC (auxin efflux carrier) family
LHKJJB_01485 LHKJJB_01485 87.4 Morganella morganii S3 yfdV putative permease, AEC (auxin efflux carrier) family
HKOGLL_01525 HKOGLL_01525 87.4 Morganella morganii S5 yfdV putative permease, AEC (auxin efflux carrier) family
PMI_RS05875 PMI_RS05875 54.8 Proteus mirabilis HI4320 - AEC family transporter

Distribution of the homologs in the orthogroup group_674

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_674

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O27435 2.43e-05 48 23 5 224 3 MTH_1382 Uncharacterized transporter MTH_1382 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04820
Feature type CDS
Gene -
Product AEC family transporter
Location 1024318 - 1025223 (strand: 1)
Length 906 (nucleotides) / 301 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_674
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03547 Membrane transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0679 General function prediction only (R) R Predicted permease, AEC (auxin efflux carrier) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13936 malonate transporter and related proteins - -

Protein Sequence

MFAILMTLWPLFALILLGCVLKRRPVFDAGFWNGAEKLNYYILFPALLISSLATAPLDNPQLPKLALSLVIMLGLATIGFVIAKRFHAIPVAEFGVLIQGAIRFNTYLGLSIVNDFYGPSGVAVAAVILAVLVPLCNIISVISLSEFQQLSLRRLLVPVLTNPLIISCIIGMLLNISGIGLPYNTHQFAKLLAGASLPLGLLCVGAALQVATIRYSALKIGFNSVIRLCLMPLLAIAVAAVTGLNDLEYHLFVIFFAIPTAPTAYILSRQLGGDSQLMAGIITFQTMVAVLTLPVVIAMIT

Flanking regions ( +/- flanking 50bp)

CATTATTCCTGTTATGATGCGGACATATCTGTCTTGCCGGAAGTCAGCTGATGTTTGCCATATTAATGACATTGTGGCCGTTATTTGCTTTGATTTTACTGGGTTGCGTATTAAAACGGCGTCCGGTATTTGACGCCGGGTTCTGGAATGGTGCGGAAAAACTCAATTACTATATTCTGTTTCCGGCACTGCTGATAAGCAGCCTCGCCACCGCGCCGCTGGATAACCCACAACTGCCGAAACTCGCGCTTTCTCTGGTTATCATGCTCGGACTGGCGACAATCGGCTTTGTGATTGCAAAGCGGTTTCATGCAATACCGGTTGCTGAATTTGGTGTGCTTATCCAGGGGGCTATCCGCTTTAATACCTATCTAGGGTTATCCATCGTCAATGATTTTTATGGTCCTTCCGGTGTCGCCGTTGCAGCGGTGATCCTCGCGGTATTAGTGCCGCTGTGTAACATTATTTCCGTGATATCCCTGTCAGAATTTCAGCAACTGTCTCTGCGCCGTCTGCTGGTTCCCGTTCTGACAAATCCGTTAATAATATCCTGCATTATCGGGATGTTACTGAATATCTCTGGTATCGGGTTGCCGTATAACACACATCAATTTGCCAAATTACTTGCCGGTGCCAGCCTGCCGCTCGGGTTGTTATGTGTCGGTGCGGCATTACAGGTTGCAACTATCCGTTACTCGGCACTGAAAATCGGCTTTAACAGTGTTATCCGCTTATGTCTTATGCCGTTGCTGGCAATTGCTGTTGCGGCTGTAACGGGGCTGAATGATCTTGAATATCACCTGTTTGTGATTTTCTTTGCTATCCCGACCGCACCGACCGCCTATATTTTATCGCGCCAGCTCGGCGGTGACAGTCAGCTAATGGCGGGTATCATTACATTTCAGACCATGGTCGCCGTGCTGACACTGCCGGTTGTCATAGCGATGATTACCTGAGCCATTAACTGAAGAATGTGCTGATAAAAAATATCATCCGGTTAACCTTT