Homologs in group_674

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02440 FBDBKF_02440 100.0 Morganella morganii S1 yfdV putative permease, AEC (auxin efflux carrier) family
EHELCC_02910 EHELCC_02910 100.0 Morganella morganii S2 yfdV putative permease, AEC (auxin efflux carrier) family
LHKJJB_01485 LHKJJB_01485 100.0 Morganella morganii S3 yfdV putative permease, AEC (auxin efflux carrier) family
HKOGLL_01525 HKOGLL_01525 100.0 Morganella morganii S5 yfdV putative permease, AEC (auxin efflux carrier) family
F4V73_RS04820 F4V73_RS04820 87.4 Morganella psychrotolerans - AEC family transporter
PMI_RS05875 PMI_RS05875 54.5 Proteus mirabilis HI4320 - AEC family transporter

Distribution of the homologs in the orthogroup group_674

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_674

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O27435 2.49e-06 51 23 9 271 3 MTH_1382 Uncharacterized transporter MTH_1382 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_00550
Feature type CDS
Gene yfdV
Product putative permease, AEC (auxin efflux carrier) family
Location 108758 - 109663 (strand: -1)
Length 906 (nucleotides) / 301 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_674
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03547 Membrane transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0679 General function prediction only (R) R Predicted permease, AEC (auxin efflux carrier) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13936 malonate transporter and related proteins - -

Protein Sequence

MFAILMTLWPLFALILLGCILKRRPVFDAGFWNGAEKLNYYILFPALLINSLAVAPLDNPQLPKLAIALVIMLGLATAAFAVVKRLRGIPTAEFGVLLQGAIRFNTYLGLSIVNDFYGPSGVAVAAVILAVLVPLCNIISVVALSEFQQLSLRRLLLPILTNPLIISCIIGMLLNVTGAGLPYNTGQFARLLAGASLPLGLLCVGAALQVATIRYSALKISLNSLVRLCVMPLLAITVATVMELTQLEYQLFVIFFAIPTAPTAYILSRQLGGDSQLMAGIITFQTMVAVLTLPVVLTMIT

Flanking regions ( +/- flanking 50bp)

TGTTGTTCCTGTTATGATGCGGGAATACGTTTCTTGCCGGATTTCCGCTGATGTTCGCAATTCTGATGACATTATGGCCGCTGTTTGCGCTGATTTTGCTCGGCTGCATTCTGAAGCGGCGGCCGGTTTTCGATGCCGGGTTTTGGAACGGCGCGGAAAAGCTGAACTACTATATCTTATTTCCGGCGCTGCTTATCAACAGCCTCGCCGTTGCTCCGCTGGATAACCCGCAACTGCCGAAACTGGCAATCGCACTGGTAATTATGCTCGGGCTGGCCACCGCGGCATTTGCGGTGGTAAAGCGTCTGCGCGGAATACCAACGGCAGAATTCGGCGTACTGCTGCAGGGCGCGATCCGCTTTAATACCTATCTCGGGCTATCCATTGTCAATGATTTTTACGGCCCGTCCGGTGTGGCGGTGGCGGCGGTGATCCTCGCGGTACTGGTTCCGCTGTGTAATATCATTTCGGTGGTTGCGTTATCTGAATTTCAGCAGTTATCGCTGCGCCGCCTGCTGTTGCCCATTCTGACAAACCCGCTGATTATCTCCTGTATTATCGGGATGCTCCTGAATGTCACCGGTGCCGGTCTTCCGTATAACACCGGCCAGTTTGCCAGACTGCTGGCCGGGGCCAGTCTGCCGCTGGGGCTGCTCTGTGTCGGGGCGGCATTGCAGGTGGCGACCATCCGCTATTCCGCCCTGAAAATCAGCCTTAACAGCCTTGTCCGCCTGTGTGTTATGCCATTGCTGGCGATTACGGTAGCGACTGTGATGGAATTAACCCAACTGGAATATCAGCTGTTTGTGATCTTTTTTGCTATTCCGACCGCACCGACCGCCTATATTTTATCGCGTCAGCTCGGCGGTGACAGTCAGCTGATGGCCGGGATTATCACGTTTCAGACAATGGTGGCGGTGCTGACTCTGCCGGTGGTTCTGACCATGATCACCTGAATAACCTGAGAAAAAATAATGAGGTCTGTTATCAAACATTTTACCGCCTC