Homologs in group_665

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02370 FBDBKF_02370 94.8 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_02840 EHELCC_02840 94.8 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_00620 NLDBIP_00620 94.8 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_01415 LHKJJB_01415 94.8 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_01455 HKOGLL_01455 94.8 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
PMI_RS05780 PMI_RS05780 74.1 Proteus mirabilis HI4320 - amino acid permease

Distribution of the homologs in the orthogroup group_665

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_665

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAE7 0.0 669 73 1 462 3 ydgI Putative arginine/ornithine antiporter Shigella flexneri
P0AAE5 0.0 669 73 1 462 1 ydgI Putative arginine/ornithine antiporter Escherichia coli (strain K12)
P0AAE6 0.0 669 73 1 462 3 ydgI Putative arginine/ornithine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q46170 1.26e-108 333 45 4 451 3 arcD Arginine/ornithine antiporter Clostridium perfringens (strain 13 / Type A)
Q5L5E6 2.25e-106 327 41 7 466 3 aaxC Arginine/agmatine antiporter Chlamydia abortus (strain DSM 27085 / S26/3)
Q822F2 4.4e-106 327 41 5 452 3 aaxC Arginine/agmatine antiporter Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)
Q9Z6M8 1.97e-103 320 40 6 466 1 aaxC Arginine/agmatine antiporter Chlamydia pneumoniae
P18275 2.75e-103 319 42 7 477 1 arcD Arginine/ornithine antiporter Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0C217 9.68e-101 312 39 5 476 3 CPE0389 Putative amino-acid transporter CPE0389 Clostridium perfringens (strain 13 / Type A)
Q0TU56 9.68e-101 312 39 5 476 3 CPF_0377 Putative amino-acid transporter CPF_0377 Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
B0BC08 2.31e-96 301 40 6 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis)
B0B7U3 2.31e-96 301 40 6 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
Q255I1 8.75e-96 300 39 6 464 3 aaxC Arginine/agmatine antiporter Chlamydia felis (strain Fe/C-56)
O84379 9.43e-96 300 40 6 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q3KLY0 9.43e-96 300 40 6 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13)
Q9PK20 7.22e-93 292 41 6 448 3 aaxC Arginine/agmatine antiporter Chlamydia muridarum (strain MoPn / Nigg)
O53092 5.74e-81 261 35 7 455 3 arcD Arginine/ornithine antiporter Latilactobacillus sakei
A2RNI5 1.14e-79 259 34 7 461 1 arcD1 Arginine/ornithine antiporter ArcD1 Lactococcus lactis subsp. cremoris (strain MG1363)
P35865 9.65e-77 251 35 5 451 3 lysI L-lysine transport protein Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A2RNI1 1.95e-64 219 32 7 461 1 arcD2 Arginine/ornithine antiporter ArcD2 Lactococcus lactis subsp. cremoris (strain MG1363)
O32204 1.1e-53 189 32 10 403 3 yvsH Putative arginine/ornithine antiporter Bacillus subtilis (strain 168)
P60064 2.8e-27 117 28 14 455 3 adiC Arginine/agmatine antiporter Shigella flexneri
P60061 2.8e-27 117 28 14 455 1 adiC Arginine/agmatine antiporter Escherichia coli (strain K12)
P60062 2.8e-27 117 28 14 455 3 adiC Arginine/agmatine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P60063 2.8e-27 117 28 14 455 1 adiC Arginine/agmatine antiporter Escherichia coli O157:H7
P60066 1.92e-24 108 27 14 457 1 adiC Arginine/agmatine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P60065 1.92e-24 108 27 14 457 3 adiC Arginine/agmatine antiporter Salmonella typhi
Q8ZGS9 8.2e-24 107 26 13 452 3 adiC Arginine/agmatine antiporter Yersinia pestis
P44768 3.35e-22 102 26 15 422 3 potE Putrescine transporter PotE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAF1 5.7e-22 101 26 16 427 1 potE Putrescine transporter PotE Escherichia coli (strain K12)
P0AAF2 5.7e-22 101 26 16 427 3 potE Putrescine transporter PotE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O34739 3.38e-09 62 22 13 396 1 steT Serine/threonine exchanger SteT Bacillus subtilis (strain 168)
P0AAE8 1.59e-07 57 22 11 381 1 cadB Cadaverine/lysine antiporter Escherichia coli (strain K12)
P0AAE9 1.59e-07 57 22 11 381 3 cadB Cadaverine/lysine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAF0 1.59e-07 57 22 11 381 3 cadB Cadaverine/lysine antiporter Escherichia coli O157:H7
Q45577 2.58e-07 56 25 11 342 1 aimA Glutamate/serine transporter AimA Bacillus subtilis (strain 168)
O34560 4.93e-07 55 24 14 331 3 yecA Uncharacterized amino acid permease YecA Bacillus subtilis (strain 168)
Q797A7 7.96e-05 48 23 9 353 3 mtrA Methylthioribose transporter Bacillus subtilis (strain 168)
P63236 0.000234 47 24 13 365 3 gadC Glutamate/gamma-aminobutyrate antiporter Shigella flexneri
P63235 0.000234 47 24 13 365 1 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli (strain K12)
Q8FHG6 0.000251 47 24 13 365 3 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P58229 0.000269 47 24 13 365 3 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli O157:H7
Q9WVR6 0.000605 45 26 4 177 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Rattus norvegicus
P39570 0.000772 45 22 9 279 2 gerBB Spore germination protein B2 Bacillus subtilis (strain 168)
Q9N1Q4 0.00085 45 25 4 177 1 SLC7A8 Large neutral amino acids transporter small subunit 2 Oryctolagus cuniculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04755
Feature type CDS
Gene -
Product basic amino acid/polyamine antiporter
Location 1005669 - 1007060 (strand: -1)
Length 1392 (nucleotides) / 463 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_665
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03758 arginine:ornithine antiporter / lysine permease - -

Protein Sequence

MDKKLSLTALTALVLSSMVGAGVFSLPQNMAEVASPAALIIGWSITGVGILFLAFALLLLSRLRPDLDGGIFTYAKDGFGELIGFCSAWGYWLCAVIANVSYLVIVFAAFSFFTDTPDHIVFGDGNTWQSLIGESVLLWIVHCLVLRGVQTAAGINKLATFAKLVPLGLFIVLAVIAFRWDTFHLDFTGVELGVPVWQQVKDTMLITLWVFIGIEGAVVVSARARRRKDVGLATMFAVVSALSIYICVTLLSMGVVARPELAEMRNPSMATLMVNLIGGSGEIIIAAGLIVSVCGAYLSWTIMAAEVPFIAALHGSFPSPFKKQNANNTPSTSLWMTNCAVQLALVLIWLSGSNYNTLLTIASEMILVPYFLVGAFLVKTALRLKKPALLGVGMVAALYGLWLIYASGLLNLLLSVVLYAPGILVFLYALQNREIKTTLHFVEWTIIALLLAGAVPALWYLVR

Flanking regions ( +/- flanking 50bp)

ATGAATACCCTGTACATATATTACCGTTGCAAACTTACCGGGATGGTACTTTGGATAAAAAACTCAGTTTAACCGCGCTTACGGCATTAGTGCTCAGTTCAATGGTCGGCGCCGGTGTTTTCAGTCTGCCGCAGAATATGGCGGAAGTCGCCAGCCCGGCGGCGCTGATCATCGGTTGGTCAATTACCGGCGTCGGCATTCTCTTTCTCGCTTTTGCATTACTGCTTCTTTCCCGTTTGCGCCCTGATCTCGATGGCGGCATTTTTACGTATGCCAAAGATGGATTCGGCGAACTGATAGGTTTCTGTTCAGCGTGGGGATACTGGCTGTGTGCCGTAATTGCCAACGTGTCTTATCTGGTTATCGTGTTTGCTGCATTCAGTTTTTTTACTGATACACCTGACCATATTGTTTTTGGTGATGGTAATACCTGGCAGTCACTGATTGGTGAATCTGTTCTGCTGTGGATTGTTCATTGCCTGGTTCTGCGCGGTGTTCAGACTGCTGCCGGTATCAATAAACTTGCCACATTTGCTAAGCTGGTGCCTCTCGGTCTGTTTATTGTGCTTGCGGTGATTGCTTTCCGCTGGGATACGTTCCACCTCGATTTTACCGGTGTTGAGCTGGGTGTCCCGGTCTGGCAACAGGTGAAAGACACGATGCTTATCACATTGTGGGTTTTTATCGGAATTGAAGGTGCGGTTGTTGTCTCTGCCCGCGCGCGGCGGCGTAAAGATGTCGGGCTGGCTACCATGTTTGCCGTGGTGTCGGCATTAAGTATCTATATTTGTGTAACGCTGTTGTCTATGGGGGTTGTTGCACGCCCGGAACTGGCTGAAATGCGCAACCCGTCGATGGCCACACTGATGGTGAATCTGATTGGCGGCAGCGGCGAAATTATTATTGCGGCGGGTTTGATAGTCTCTGTCTGTGGCGCATATCTGAGCTGGACAATTATGGCTGCTGAAGTCCCGTTTATTGCAGCACTTCACGGCTCTTTTCCGTCTCCGTTCAAAAAACAGAATGCGAACAATACGCCATCGACATCATTATGGATGACGAACTGCGCTGTGCAGCTTGCCCTGGTGCTGATCTGGCTGAGTGGCAGCAATTATAATACATTGCTTACTATTGCGTCTGAAATGATTCTGGTGCCCTACTTCCTTGTCGGTGCTTTCCTGGTAAAAACAGCCCTGAGACTAAAAAAACCGGCACTGCTGGGTGTGGGAATGGTCGCGGCACTGTACGGATTATGGCTGATTTATGCCTCAGGTTTGCTCAATCTGCTACTTTCCGTGGTACTTTACGCCCCGGGAATCCTGGTATTTCTGTACGCGCTGCAAAATCGCGAAATAAAAACCACGCTGCACTTTGTTGAGTGGACCATTATAGCCCTTCTGCTTGCAGGCGCGGTTCCTGCGCTCTGGTATTTAGTCAGATAACTGTCTTGAGCTGAACGGGCCACCCGGCCCGCTCAGCTATGTCTGTAAAT