Homologs in group_665

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02370 FBDBKF_02370 74.7 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_02840 EHELCC_02840 74.7 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_00620 NLDBIP_00620 74.7 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_01415 LHKJJB_01415 74.7 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_01455 HKOGLL_01455 74.7 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
F4V73_RS04755 F4V73_RS04755 74.1 Morganella psychrotolerans - basic amino acid/polyamine antiporter

Distribution of the homologs in the orthogroup group_665

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_665

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAE7 0.0 655 68 1 462 3 ydgI Putative arginine/ornithine antiporter Shigella flexneri
P0AAE5 0.0 655 68 1 462 1 ydgI Putative arginine/ornithine antiporter Escherichia coli (strain K12)
P0AAE6 0.0 655 68 1 462 3 ydgI Putative arginine/ornithine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q46170 7.88e-115 348 45 4 451 3 arcD Arginine/ornithine antiporter Clostridium perfringens (strain 13 / Type A)
P0C217 1.42e-111 340 39 5 474 3 CPE0389 Putative amino-acid transporter CPE0389 Clostridium perfringens (strain 13 / Type A)
Q0TU56 1.42e-111 340 39 5 474 3 CPF_0377 Putative amino-acid transporter CPF_0377 Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
P18275 3.25e-110 337 44 8 477 1 arcD Arginine/ornithine antiporter Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q822F2 2.51e-109 335 40 5 458 3 aaxC Arginine/agmatine antiporter Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)
Q9Z6M8 5.58e-108 331 41 5 461 1 aaxC Arginine/agmatine antiporter Chlamydia pneumoniae
Q5L5E6 1.97e-107 330 39 5 458 3 aaxC Arginine/agmatine antiporter Chlamydia abortus (strain DSM 27085 / S26/3)
Q255I1 1.04e-99 310 39 4 458 3 aaxC Arginine/agmatine antiporter Chlamydia felis (strain Fe/C-56)
O84379 8.04e-99 308 39 4 459 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q3KLY0 8.04e-99 308 39 4 459 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13)
B0BC08 9.86e-99 307 39 4 459 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis)
B0B7U3 9.86e-99 307 39 4 459 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
Q9PK20 2.76e-95 298 40 4 459 3 aaxC Arginine/agmatine antiporter Chlamydia muridarum (strain MoPn / Nigg)
O53092 2.14e-89 283 38 4 449 3 arcD Arginine/ornithine antiporter Latilactobacillus sakei
A2RNI5 1.96e-85 274 35 7 464 1 arcD1 Arginine/ornithine antiporter ArcD1 Lactococcus lactis subsp. cremoris (strain MG1363)
P35865 4.35e-78 254 33 5 466 3 lysI L-lysine transport protein Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A2RNI1 8.67e-74 243 33 8 476 1 arcD2 Arginine/ornithine antiporter ArcD2 Lactococcus lactis subsp. cremoris (strain MG1363)
O32204 2.14e-61 210 32 11 471 3 yvsH Putative arginine/ornithine antiporter Bacillus subtilis (strain 168)
P60064 2.21e-27 117 26 10 425 3 adiC Arginine/agmatine antiporter Shigella flexneri
P60061 2.21e-27 117 26 10 425 1 adiC Arginine/agmatine antiporter Escherichia coli (strain K12)
P60062 2.21e-27 117 26 10 425 3 adiC Arginine/agmatine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P60063 2.21e-27 117 26 10 425 1 adiC Arginine/agmatine antiporter Escherichia coli O157:H7
P0AAF1 5.31e-27 115 26 13 447 1 potE Putrescine transporter PotE Escherichia coli (strain K12)
P0AAF2 5.31e-27 115 26 13 447 3 potE Putrescine transporter PotE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P60066 6.02e-27 115 26 12 456 1 adiC Arginine/agmatine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P60065 6.02e-27 115 26 12 456 3 adiC Arginine/agmatine antiporter Salmonella typhi
Q8ZGS9 2.88e-26 114 25 14 469 3 adiC Arginine/agmatine antiporter Yersinia pestis
P44768 3.11e-22 102 26 12 420 3 potE Putrescine transporter PotE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q45577 3.77e-14 78 27 10 341 1 aimA Glutamate/serine transporter AimA Bacillus subtilis (strain 168)
O34739 2.14e-13 75 23 9 392 1 steT Serine/threonine exchanger SteT Bacillus subtilis (strain 168)
P0AAE8 2.8e-12 72 24 8 377 1 cadB Cadaverine/lysine antiporter Escherichia coli (strain K12)
P0AAE9 2.8e-12 72 24 8 377 3 cadB Cadaverine/lysine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAF0 2.8e-12 72 24 8 377 3 cadB Cadaverine/lysine antiporter Escherichia coli O157:H7
P39570 3.67e-05 49 24 11 282 2 gerBB Spore germination protein B2 Bacillus subtilis (strain 168)
O34560 0.000178 47 24 11 287 3 yecA Uncharacterized amino acid permease YecA Bacillus subtilis (strain 168)
Q9WVR6 0.00018 47 33 2 90 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Rattus norvegicus
P94383 0.000214 47 31 3 97 3 ycgH Uncharacterized transporter YcgH Bacillus subtilis (strain 168)
Q9QXW9 0.000297 47 32 2 90 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Mus musculus
P37034 0.000321 46 24 13 338 3 lpg1691 Uncharacterized transporter lpg1691 Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q9N1Q4 0.000334 46 32 2 90 1 SLC7A8 Large neutral amino acids transporter small subunit 2 Oryctolagus cuniculus
Q5RAE3 0.000367 46 32 2 90 2 SLC7A8 Large neutral amino acids transporter small subunit 2 Pongo abelii
Q9UHI5 0.000367 46 32 2 90 1 SLC7A8 Large neutral amino acids transporter small subunit 2 Homo sapiens

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05780
Feature type CDS
Gene -
Product amino acid permease
Location 1262202 - 1263596 (strand: -1)
Length 1395 (nucleotides) / 464 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_665
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03758 arginine:ornithine antiporter / lysine permease - -

Protein Sequence

MNKKLGLMSLTALVLSSMVGAGVFSLPQNMAEVASPAALIIGWIITGVGILFLALSLLLLSRLRPDLDGGIFTYAKEGFGEFIGFCSAWGYWVCAVVANVSYLVIVFAAVSFFTDSPNNIIFGDGNTWQALLGESILLWVVHFLVLRGVQTAASINLMATMAKLIPLGLFIIVALLAFNMDIFTFDFEGIKMGVPVWEQVKNTMLITLWVFIGIEGAVVVSARAKNRRDVGLATIFAVVIALIIYILVTLLSQGLVSQSELAMMKNPSMAPLLVQLIGNIGEIVIAAGLILSVCGAYLSWTIMAAEVPYIAALHHSFPKQLSKQNHNDAPSSSLWFTNLAVQLSLVLIWLTGSNYNTLLTIASEMILVPYFLVGAFLFKVAIERSSRGLLLIAIPASLYGLWLLYASGVINLLLSVVLYAPGVLIFLYSRKQYKDKQSLNTSEKILLMMVLIGAIPACGYLVFN

Flanking regions ( +/- flanking 50bp)

CAAGAAAATACGCTATTTATTCACAATTTTAATCATGCAGGAACTTATCTTTGAATAAAAAACTTGGTTTAATGTCACTAACAGCGTTAGTGCTAAGCTCAATGGTTGGTGCAGGTGTATTCAGTTTGCCTCAGAATATGGCTGAGGTTGCAAGCCCTGCGGCACTGATTATCGGTTGGATAATAACAGGGGTTGGCATCCTTTTTCTCGCCCTATCATTGTTATTGCTTTCTCGCTTAAGACCTGATCTTGATGGCGGTATTTTTACCTATGCGAAAGAAGGATTTGGTGAATTTATTGGCTTTTGTTCTGCTTGGGGCTATTGGGTCTGTGCGGTAGTTGCCAATGTCTCTTATTTAGTCATCGTTTTCGCTGCTGTGAGTTTTTTTACCGACAGCCCTAATAATATTATTTTTGGTGATGGTAATACATGGCAGGCATTGTTGGGTGAATCAATCTTACTTTGGGTTGTGCACTTTTTAGTTCTACGAGGTGTACAAACAGCCGCTAGTATCAATTTAATGGCCACGATGGCAAAATTAATACCATTGGGGTTATTTATTATTGTTGCCCTACTTGCCTTTAATATGGATATTTTTACCTTTGATTTCGAAGGGATAAAAATGGGCGTGCCCGTTTGGGAACAAGTAAAAAATACCATGTTAATTACTTTATGGGTATTTATTGGTATTGAAGGGGCCGTTGTCGTATCTGCAAGAGCAAAAAATAGAAGAGATGTTGGTTTAGCGACAATATTTGCGGTTGTGATCGCGCTGATTATTTATATTCTCGTTACCCTATTATCTCAAGGATTAGTTAGCCAATCAGAGCTTGCTATGATGAAAAACCCATCTATGGCACCTTTGCTGGTTCAACTAATTGGAAATATAGGTGAGATAGTTATTGCCGCCGGCCTTATTCTATCGGTATGTGGCGCTTATTTAAGCTGGACAATTATGGCTGCTGAAGTCCCTTATATTGCCGCATTACACCACTCTTTTCCCAAACAACTGAGTAAACAAAATCACAATGATGCGCCTTCCTCTTCCTTGTGGTTTACTAATTTAGCTGTTCAATTATCACTAGTATTAATTTGGCTTACTGGTAGTAATTACAATACCCTACTGACCATCGCGTCAGAAATGATCCTCGTTCCTTATTTCCTGGTTGGTGCTTTCTTATTTAAAGTTGCCATAGAACGCAGTAGCCGAGGATTATTACTGATAGCAATACCTGCAAGCCTCTATGGTTTATGGTTACTTTATGCATCAGGTGTAATTAATTTATTACTTTCCGTCGTTCTCTATGCACCCGGTGTATTAATATTTTTATATTCACGAAAACAATATAAAGATAAACAGTCATTAAATACTAGTGAAAAAATACTACTGATGATGGTATTAATTGGCGCAATTCCTGCTTGTGGCTATTTAGTATTTAATTAAGATCTATATTCCCCCTTGAGAAAGAAGCAAGGGGGCATCTCTTTCCCTTC