Homologs in group_665

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02370 FBDBKF_02370 100.0 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_02840 EHELCC_02840 100.0 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_00620 NLDBIP_00620 100.0 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_01415 LHKJJB_01415 100.0 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
F4V73_RS04755 F4V73_RS04755 94.8 Morganella psychrotolerans - basic amino acid/polyamine antiporter
PMI_RS05780 PMI_RS05780 74.7 Proteus mirabilis HI4320 - amino acid permease

Distribution of the homologs in the orthogroup group_665

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_665

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAE7 0.0 672 73 1 462 3 ydgI Putative arginine/ornithine antiporter Shigella flexneri
P0AAE5 0.0 672 73 1 462 1 ydgI Putative arginine/ornithine antiporter Escherichia coli (strain K12)
P0AAE6 0.0 672 73 1 462 3 ydgI Putative arginine/ornithine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q46170 6.89e-109 333 46 6 449 3 arcD Arginine/ornithine antiporter Clostridium perfringens (strain 13 / Type A)
Q822F2 1.12e-106 328 41 4 452 3 aaxC Arginine/agmatine antiporter Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)
Q5L5E6 1.87e-106 327 41 6 471 3 aaxC Arginine/agmatine antiporter Chlamydia abortus (strain DSM 27085 / S26/3)
P18275 3.88e-105 324 44 6 477 1 arcD Arginine/ornithine antiporter Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9Z6M8 7.47e-104 321 41 4 452 1 aaxC Arginine/agmatine antiporter Chlamydia pneumoniae
P0C217 3.1e-99 308 39 4 480 3 CPE0389 Putative amino-acid transporter CPE0389 Clostridium perfringens (strain 13 / Type A)
Q0TU56 3.1e-99 308 39 4 480 3 CPF_0377 Putative amino-acid transporter CPF_0377 Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
B0BC08 1.6e-97 304 40 5 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis)
B0B7U3 1.6e-97 304 40 5 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
O84379 1.01e-96 302 40 5 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q3KLY0 1.01e-96 302 40 5 448 3 aaxC Arginine/agmatine antiporter Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13)
Q255I1 1.48e-96 302 41 5 451 3 aaxC Arginine/agmatine antiporter Chlamydia felis (strain Fe/C-56)
Q9PK20 1.27e-93 294 41 5 448 3 aaxC Arginine/agmatine antiporter Chlamydia muridarum (strain MoPn / Nigg)
O53092 3.79e-84 270 36 7 455 3 arcD Arginine/ornithine antiporter Latilactobacillus sakei
A2RNI5 1.92e-80 261 34 6 461 1 arcD1 Arginine/ornithine antiporter ArcD1 Lactococcus lactis subsp. cremoris (strain MG1363)
P35865 6.94e-77 251 34 5 456 3 lysI L-lysine transport protein Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A2RNI1 5.32e-66 223 32 8 462 1 arcD2 Arginine/ornithine antiporter ArcD2 Lactococcus lactis subsp. cremoris (strain MG1363)
O32204 1.9e-53 189 32 10 403 3 yvsH Putative arginine/ornithine antiporter Bacillus subtilis (strain 168)
P60064 1.08e-27 118 27 12 455 3 adiC Arginine/agmatine antiporter Shigella flexneri
P60061 1.08e-27 118 27 12 455 1 adiC Arginine/agmatine antiporter Escherichia coli (strain K12)
P60062 1.08e-27 118 27 12 455 3 adiC Arginine/agmatine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P60063 1.08e-27 118 27 12 455 1 adiC Arginine/agmatine antiporter Escherichia coli O157:H7
P60066 1.25e-24 109 26 12 455 1 adiC Arginine/agmatine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P60065 1.25e-24 109 26 12 455 3 adiC Arginine/agmatine antiporter Salmonella typhi
Q8ZGS9 1.83e-24 108 26 12 432 3 adiC Arginine/agmatine antiporter Yersinia pestis
P44768 1.13e-22 103 25 14 426 3 potE Putrescine transporter PotE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAF1 1.22e-22 103 26 16 427 1 potE Putrescine transporter PotE Escherichia coli (strain K12)
P0AAF2 1.22e-22 103 26 16 427 3 potE Putrescine transporter PotE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O34739 8.94e-09 61 22 13 396 1 steT Serine/threonine exchanger SteT Bacillus subtilis (strain 168)
P0AAE8 1.18e-07 57 23 11 381 1 cadB Cadaverine/lysine antiporter Escherichia coli (strain K12)
P0AAE9 1.18e-07 57 23 11 381 3 cadB Cadaverine/lysine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAF0 1.18e-07 57 23 11 381 3 cadB Cadaverine/lysine antiporter Escherichia coli O157:H7
Q45577 2.79e-07 56 25 10 340 1 aimA Glutamate/serine transporter AimA Bacillus subtilis (strain 168)
O34560 2.19e-06 53 23 13 328 3 yecA Uncharacterized amino acid permease YecA Bacillus subtilis (strain 168)
P39570 4.28e-05 49 22 12 345 2 gerBB Spore germination protein B2 Bacillus subtilis (strain 168)
Q8VIE6 7.59e-05 48 23 15 351 1 Slc7a12 Solute carrier family 7 member 12 Mus musculus
Q797A7 8.39e-05 48 23 14 457 3 mtrA Methylthioribose transporter Bacillus subtilis (strain 168)
Q9WVR6 0.000648 45 27 4 177 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Rattus norvegicus

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01455
Feature type CDS
Gene potE
Product Serine transporter YbeC, amino acid:H+ symporter family
Location 272667 - 274058 (strand: -1)
Length 1392 (nucleotides) / 463 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_665
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03758 arginine:ornithine antiporter / lysine permease - -

Protein Sequence

MDKKLSLTALTALVLSSMVGAGVFSLPQNMAEVASPAALIIGWSITGVGILFLAFALLLLSRLRPDLDGGIFTYAKDGFGELIGFCSAWGYWLCAVIANVSYLVIVFAAFSFFTDTPDNIVFGDGNTWQALIGESVLLWFVHCLVLRGVQTAAGINKLATFAKLVPLGLFIVLAVIAFRWDTFHLDFTGVDLGVPVWQQVKDTMLITLWVFIGIEGAVVVSARARRRKDVGLATMMAVISALTIYILVTLLSMGVVARPELAEMRNPSMATLMVNLIGGSGEIIIAAGLIISVCGAYLSWTIMAAEVPFIAALHGSFPSPFKKQNANNAPSSSLWMTNGAVQLALVLIWLSGSNYNTLLTIASEMILVPYFLVGAFLVKTALRMKKPALLGVGMIAAMYGLWLIYASGIINLMLSVVLYAPGILVFLYALKNREIKTTLHFIEWSIIAALLIAAVPALWYLVR

Flanking regions ( +/- flanking 50bp)

TGACTGCATGAATACCCTGCTTACCGCATCAGATTTACCGGGAAGGTCTTTTGGATAAGAAACTCAGTTTAACCGCGCTCACCGCATTAGTGCTCAGTTCTATGGTTGGTGCCGGTGTGTTTAGTCTTCCGCAGAATATGGCCGAAGTGGCCAGTCCGGCTGCACTTATTATCGGCTGGTCAATTACCGGTGTCGGTATCCTCTTTCTGGCTTTCGCCCTGCTGCTGCTTTCCCGGCTGCGTCCGGATCTCGACGGCGGCATCTTTACCTATGCCAAAGACGGTTTCGGGGAACTGATTGGTTTCTGCTCCGCCTGGGGATACTGGTTATGTGCAGTGATCGCCAACGTCTCCTATCTGGTGATTGTGTTTGCGGCGTTCAGCTTTTTTACGGATACCCCGGACAATATTGTTTTCGGCGACGGAAATACCTGGCAGGCGCTGATTGGTGAATCTGTTCTGCTGTGGTTTGTGCATTGCCTGGTGCTGCGCGGCGTACAGACTGCCGCCGGTATCAATAAACTGGCAACGTTCGCTAAACTGGTGCCTCTCGGCCTGTTTATCGTCCTGGCGGTAATCGCATTCCGCTGGGATACCTTCCATCTTGATTTCACCGGTGTGGATCTCGGCGTGCCGGTGTGGCAGCAGGTGAAAGATACCATGCTGATCACGCTGTGGGTATTTATCGGGATTGAAGGTGCGGTTGTGGTTTCCGCCCGTGCCCGCCGCCGTAAAGATGTCGGTTTGGCGACCATGATGGCGGTGATTTCCGCACTGACGATTTATATCCTGGTTACCCTGCTGTCAATGGGGGTTGTTGCCCGTCCGGAACTGGCAGAAATGCGCAACCCTTCGATGGCAACACTGATGGTGAACCTGATTGGCGGCAGTGGTGAGATTATTATCGCAGCGGGTCTGATTATTTCTGTCTGTGGTGCATATCTGAGCTGGACAATTATGGCTGCCGAAGTGCCGTTTATCGCCGCACTGCATGGCTCTTTCCCGTCACCGTTTAAAAAACAGAATGCGAATAATGCCCCATCCTCCTCTTTATGGATGACTAACGGTGCGGTACAGCTGGCACTGGTGCTGATCTGGCTCAGCGGCAGTAATTACAATACGCTGCTGACCATTGCTTCTGAAATGATTCTGGTGCCCTATTTCCTGGTCGGTGCATTCCTGGTAAAAACCGCCCTGAGAATGAAAAAACCGGCACTGCTCGGCGTGGGTATGATTGCGGCAATGTATGGCTTATGGCTGATTTATGCATCCGGCATTATCAATCTGATGCTGTCAGTTGTGCTCTATGCACCGGGTATTCTGGTATTTCTCTATGCCCTGAAAAACCGTGAGATAAAAACCACACTGCATTTTATCGAGTGGAGCATTATTGCAGCCCTGCTGATAGCGGCAGTTCCCGCACTCTGGTATCTGGTGCGCTGAAAATCTGAAAACAGGAGCCGGTCACTGACCGGCTTTTTTGTCTCCTTCCC