Homologs in group_606

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01900 FBDBKF_01900 87.6 Morganella morganii S1 - DUF2583 domain-containing protein
EHELCC_02370 EHELCC_02370 87.6 Morganella morganii S2 - DUF2583 domain-containing protein
NLDBIP_01090 NLDBIP_01090 87.6 Morganella morganii S4 - DUF2583 domain-containing protein
LHKJJB_00945 LHKJJB_00945 87.6 Morganella morganii S3 - DUF2583 domain-containing protein
HKOGLL_00985 HKOGLL_00985 87.6 Morganella morganii S5 - DUF2583 domain-containing protein
PMI_RS05240 PMI_RS05240 61.4 Proteus mirabilis HI4320 ychH stress-induced protein YchH

Distribution of the homologs in the orthogroup group_606

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_606

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AB49 1.03e-10 55 36 1 86 4 ychH Uncharacterized protein YchH Escherichia coli (strain K12)
P0AB50 1.03e-10 55 36 1 86 4 ychH Uncharacterized protein YchH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AB51 1.03e-10 55 36 1 86 4 ychH Uncharacterized protein YchH Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04245
Feature type CDS
Gene -
Product stress-induced protein YchH
Location 898213 - 898482 (strand: 1)
Length 270 (nucleotides) / 89 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_606
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10762 Protein of unknown function (DUF2583)

Protein Sequence

MKRKLTLLVGNLLMIVGMLLMVGSMAFTFSVLIFALPVPDVYSEASLMGIFIGALVWLAGAGISGRRECIADKYYWLRNFHSRYRRRMP

Flanking regions ( +/- flanking 50bp)

TGCTTTCGTACTTTTAGTTGTTTTGAGACAAATGAGTGACGGAGGTTTCTATGAAACGTAAACTAACCTTATTAGTAGGGAATCTGCTGATGATCGTCGGTATGTTACTGATGGTCGGCAGTATGGCCTTTACTTTCAGCGTTCTTATCTTTGCACTTCCTGTGCCTGATGTTTATTCTGAGGCTTCCCTTATGGGGATCTTTATCGGTGCTTTAGTCTGGTTAGCCGGAGCCGGTATAAGCGGGCGCCGTGAATGTATCGCAGACAAATATTACTGGCTGCGTAACTTTCACAGCCGCTATCGTCGCCGGATGCCGTAACGCCGTAACAAATACCGGTCATTTTGTTCTGCATACAAAAAACCCGTTGT