Homologs in group_291

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07045 FBDBKF_07045 25.3 Morganella morganii S1 macA macrolide transporter subunit MacA
EHELCC_03925 EHELCC_03925 25.3 Morganella morganii S2 macA macrolide transporter subunit MacA
NLDBIP_03925 NLDBIP_03925 25.3 Morganella morganii S4 macA macrolide transporter subunit MacA
LHKJJB_09755 LHKJJB_09755 25.3 Morganella morganii S3 macA macrolide transporter subunit MacA
HKOGLL_09220 HKOGLL_09220 25.3 Morganella morganii S5 macA macrolide transporter subunit MacA
F4V73_RS01230 F4V73_RS01230 25.2 Morganella psychrotolerans macA macrolide transporter subunit MacA
PMI_RS03375 PMI_RS03375 25.8 Proteus mirabilis HI4320 macA macrolide transporter subunit MacA

Distribution of the homologs in the orthogroup group_291

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_291

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9ZHD0 0.0 559 65 1 407 3 silB Putative membrane fusion protein SilB Salmonella typhimurium
Q8XEH9 0.0 525 61 2 409 3 cusB Cation efflux system protein CusB Escherichia coli O157:H7
P77239 0.0 522 61 2 409 1 cusB Cation efflux system protein CusB Escherichia coli (strain K12)
Q8CWA2 0.0 521 61 2 409 3 cusB Cation efflux system protein CusB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P43505 6.49e-08 58 25 3 192 3 mtrC Membrane fusion protein MtrC Neisseria gonorrhoeae
Q8FWV8 0.000142 47 27 6 188 1 bepF Efflux pump periplasmic linker BepF Brucella suis biovar 1 (strain 1330)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03930
Feature type CDS
Gene -
Product efflux RND transporter periplasmic adaptor subunit
Location 832486 - 833745 (strand: 1)
Length 1260 (nucleotides) / 419 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_291
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PF19335 Heavy metal binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0845 Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 MV Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07798 membrane fusion protein, copper/silver efflux system Two-component system -

Protein Sequence

MASATLKYSAVIISSLIIGGAVAIGISPYFASAQNDTAVQEPERKVLFWYDPMKPDTKFDKPGKSPFMDMDLVPKYADEEGGGTGNGVRIDPVQQQNLGLKTAQVRRGTLDYIRTFPANVMFNDYQFVIVQARAGGFIEKVYPLTTGDRVRKGMPLIEITVPEWVEAQSEYLLLKETGGTAVQQRGVLERLRLAGMPENHIRQLQQKREIQTRFTITAPIDGVLTAFDLKTGMNIGKENIVAKIQGIDPIWLTVAVPESLAYLLDKQADLRLSVPSQPDKTFKITRRDLLAGADPVSRTLQLRLQVENPEELLKPGMNAYLTLTAKSGDMLLIPSRAVIDTGSEQRVITQDENGKFVPKKITVLRDSGGDTGIGNELREGEKVVVNGLFLIDSEANINGALERMRDTDPHSAYQGGGHD

Flanking regions ( +/- flanking 50bp)

TTCAGTCAATCTCAGTCCGGTAATTCACCGGCTATTTCCGGGGAACGGACATGGCATCTGCAACATTAAAATACAGCGCGGTGATCATCAGCAGCCTGATTATCGGCGGTGCGGTGGCAATCGGGATCTCACCGTATTTCGCTTCTGCACAGAATGATACCGCCGTTCAGGAACCGGAGCGGAAAGTCCTCTTTTGGTATGACCCGATGAAACCCGATACCAAATTTGATAAGCCGGGTAAATCCCCGTTTATGGATATGGATCTGGTGCCTAAATATGCGGATGAAGAGGGTGGCGGAACAGGCAACGGCGTACGGATAGACCCGGTTCAGCAGCAGAATCTCGGGTTGAAAACTGCACAGGTTCGTCGCGGAACGCTGGATTACATCCGCACATTTCCGGCAAATGTGATGTTTAATGATTATCAGTTTGTCATTGTCCAGGCGCGTGCCGGGGGATTTATTGAAAAAGTCTATCCGCTGACCACCGGTGACCGCGTGCGCAAAGGGATGCCGCTGATTGAGATCACCGTGCCGGAATGGGTGGAAGCGCAGAGTGAATATCTGCTGCTCAAAGAAACCGGCGGCACCGCTGTACAACAGCGCGGCGTGCTGGAACGCCTGCGCCTTGCAGGAATGCCGGAAAATCATATCCGGCAGTTGCAGCAAAAACGGGAAATTCAAACCCGGTTTACAATCACTGCCCCGATTGACGGTGTTCTGACTGCATTTGATCTGAAAACCGGGATGAATATCGGCAAAGAAAATATTGTTGCCAAAATTCAGGGGATCGATCCCATCTGGCTGACCGTCGCGGTACCGGAATCTCTCGCCTACCTGCTGGATAAACAGGCGGACTTGCGCCTTTCAGTACCGTCTCAGCCGGATAAAACCTTCAAAATCACCCGGCGCGACCTGCTGGCGGGGGCGGACCCGGTCAGTCGCACACTTCAGTTGCGTTTACAGGTTGAAAACCCGGAGGAATTGCTCAAACCCGGCATGAATGCGTATCTCACATTAACAGCAAAGAGCGGCGATATGCTGCTTATTCCGTCGCGGGCGGTGATTGATACCGGCAGTGAGCAACGGGTGATAACTCAGGATGAAAACGGGAAGTTTGTACCGAAAAAAATCACGGTGCTGCGCGATTCAGGGGGGGATACCGGGATTGGTAATGAACTGCGTGAAGGGGAAAAAGTAGTGGTGAACGGACTGTTCCTGATTGATTCCGAAGCCAATATTAATGGTGCGCTGGAGCGGATGCGCGATACTGACCCGCACTCAGCATATCAGGGAGGCGGTCATGATTGAATGGATTATCCGGCGCTCAGTCGCCAACCGCTTTCTGGTGATGTTCGGTG