Homologs in group_303

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07995 FBDBKF_07995 22.5 Morganella morganii S1 tolC Outer membrane protein TolC
EHELCC_13825 EHELCC_13825 22.5 Morganella morganii S2 tolC Outer membrane protein TolC
NLDBIP_14270 NLDBIP_14270 22.5 Morganella morganii S4 tolC Outer membrane protein TolC
LHKJJB_08580 LHKJJB_08580 22.5 Morganella morganii S3 tolC Outer membrane protein TolC
HKOGLL_08130 HKOGLL_08130 22.5 Morganella morganii S5 tolC Outer membrane protein TolC
F4V73_RS12990 F4V73_RS12990 19.5 Morganella psychrotolerans - TolC family outer membrane protein
PMI_RS01340 PMI_RS01340 18.7 Proteus mirabilis HI4320 - TolC family outer membrane protein

Distribution of the homologs in the orthogroup group_303

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_303

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8XBY3 2.08e-179 512 56 2 460 3 cusC Cation efflux system protein CusC Escherichia coli O157:H7
Q8CWA4 3.55e-179 512 56 2 460 3 cusC Cation efflux system protein CusC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P77211 2.49e-177 507 56 2 458 1 cusC Cation efflux system protein CusC Escherichia coli (strain K12)
Q9ZHD2 4.72e-171 491 55 1 459 3 silC Probable outer membrane lipoprotein SilC Salmonella typhimurium
Q93PU3 2.28e-94 296 38 8 469 2 ttgI Toluene efflux pump outer membrane protein TtgI Pseudomonas putida (strain DOT-T1E)
O31101 2.28e-94 296 38 8 469 2 srpC Solvent efflux pump outer membrane protein SrpC Pseudomonas putida
Q51487 3.33e-90 285 39 8 458 1 oprM Outer membrane protein OprM Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9KWV3 1.57e-85 273 37 8 470 2 ttgF Toluene efflux pump outer membrane protein TtgF Pseudomonas putida (strain DOT-T1E)
Q849R1 1.57e-85 273 37 8 470 3 sepC Probable efflux pump outer membrane protein SepC Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q88N32 5.89e-83 266 35 5 460 1 ttgC Probable efflux pump outer membrane protein TtgC Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P0C071 5.89e-83 266 35 5 460 1 mepC Multidrug/solvent efflux pump outer membrane protein MepC Pseudomonas putida
Q9KJC1 6.77e-83 266 35 5 460 2 arpC Antibiotic efflux pump outer membrane protein ArpC Pseudomonas putida
Q9WWZ8 9.63e-83 266 35 5 460 2 ttgC Toluene efflux pump outer membrane protein TtgC Pseudomonas putida (strain DOT-T1E)
Q51397 1.55e-71 237 35 7 452 1 oprJ Outer membrane protein OprJ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P24145 8.91e-40 152 27 10 451 3 nodT Nodulation protein T Rhizobium leguminosarum bv. trifolii
Q9I189 8.13e-33 132 28 8 476 1 opmQ Pyoverdine export outer membrane protein OpmQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q88F87 3.05e-29 122 30 5 422 1 opmQ Pyoverdine export outer membrane protein OpmQ Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P45217 1.07e-27 118 26 11 394 3 HI_1462 Uncharacterized protein HI_1462 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P15727 1.55e-25 112 24 9 460 3 nodT Nodulation protein T Rhizobium leguminosarum bv. viciae
Q2EHL7 2.25e-25 111 23 8 392 1 tdeA Toxin and drug export protein A Aggregatibacter actinomycetemcomitans
Q83P87 1.14e-23 106 23 6 480 3 mdtP Multidrug resistance outer membrane protein MdtP Shigella flexneri
Q8CVH8 3.63e-23 105 23 6 480 3 mdtP Multidrug resistance outer membrane protein MdtP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5R9 1.07e-22 103 23 6 480 3 mdtP Multidrug resistance outer membrane protein MdtP Escherichia coli O157:H7
P32714 1.43e-22 103 23 5 479 3 mdtP Multidrug resistance outer membrane protein MdtP Escherichia coli (strain K12)
P24126 3.67e-15 81 23 8 372 3 fusA Fusaric acid resistance protein FusA Burkholderia cepacia
Q83KF5 5.82e-09 61 21 9 479 5 mdtQ Putative multidrug resistance outer membrane protein MdtQ Shigella flexneri
P33369 3.21e-08 59 21 11 483 5 mdtQ Putative multidrug resistance outer membrane protein MdtQ Escherichia coli (strain K12)
Q8FFV6 7.41e-08 58 26 1 198 3 mdtQ Multidrug resistance outer membrane protein MdtQ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X659 7.47e-08 58 26 1 198 3 mdtQ Multidrug resistance outer membrane protein MdtQ Escherichia coli O157:H7
P44165 5.82e-07 55 29 8 199 3 HI_1340 Uncharacterized protein HI_1340 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q03027 1.8e-06 53 23 11 351 3 aprF Alkaline protease secretion protein AprF Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8G0Y6 1.6e-05 50 22 11 406 1 bepC Outer membrane efflux protein BepC Brucella suis biovar 1 (strain 1330)
Q54001 0.000339 46 21 4 312 1 tolC Outer membrane protein TolC Salmonella enteritidis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03920
Feature type CDS
Gene -
Product Cu(I)/Ag(I) efflux RND transporter outer membrane protein
Location 830572 - 831954 (strand: 1)
Length 1383 (nucleotides) / 460 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_303
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02321 Outer membrane efflux protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1538 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein TolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07796 outer membrane protein, copper/silver efflux system Two-component system -

Protein Sequence

MRILKYISLSTFFVLTGCVSFAPDYQRPALPVPQQFSLAQNGLVSTGDYSVPGWRQFFANPAATALIEQTLRTNADLKTAILNVREAREKYGVTRADQLPQVNGNLSATSQGRFTGEKRTEDSYETGFSLSFEPDFWGRLQNLSDADQQNFLATQEAQRTAQILLISTAMQSYYQYHLATEQLAISRESLSYYVQSYRFIERRLVTGNSNVLSLEQARGQTESAQADIAAREGELKQAANALQRVSGDYRPLLPVNPADALVSPEVNLPANLRSDILLQRPDITEAEHLLLAANANIGAARAAFFPSVSLTGDISGSSSNLASVLDAATGIWRFIPKITIPVFNGGRNSANLALAEIRQEKAVVIYEQRIQNAFKDVADALALRNSLAQQVAAQTRYAASLDITLQRAQFLFARGQSSYLDVLDAQRALLTTRQTLATLKYNQKINEITLFAALGGGWKA

Flanking regions ( +/- flanking 50bp)

CACCCCGGTACACTGCGGCTATTATGTTAATAACCGGCGGACCGGACAGTATGCGGATTTTAAAATATATCTCACTGAGCACCTTTTTTGTTCTGACCGGCTGCGTTTCGTTTGCGCCGGATTATCAGCGTCCGGCGCTCCCGGTTCCTCAGCAATTTTCCCTGGCGCAGAACGGGCTGGTCAGCACCGGTGATTACAGTGTTCCGGGCTGGCGTCAGTTTTTCGCCAATCCTGCCGCCACGGCACTGATTGAGCAGACACTGCGCACAAATGCCGATTTAAAAACAGCGATCCTCAATGTCCGTGAAGCCCGTGAGAAATACGGTGTGACGCGGGCAGACCAACTACCGCAGGTAAACGGCAATCTCAGTGCCACGTCACAAGGCAGATTTACCGGCGAAAAACGGACGGAAGACAGTTATGAAACCGGTTTTTCACTGAGCTTTGAGCCGGATTTCTGGGGACGGTTACAGAACCTGAGTGACGCCGATCAGCAAAATTTTCTTGCCACACAGGAAGCGCAGCGGACTGCGCAAATCCTGCTGATAAGTACAGCGATGCAGAGTTATTACCAGTATCACCTTGCCACAGAGCAGCTTGCTATCAGCCGTGAGAGCCTGAGCTACTATGTGCAATCTTACCGGTTTATTGAGCGCCGTCTGGTGACCGGGAACAGCAATGTGCTCTCGCTGGAGCAGGCGCGCGGACAAACGGAAAGCGCACAGGCAGATATTGCCGCGCGTGAGGGTGAACTGAAACAGGCCGCTAATGCGTTGCAGCGGGTATCCGGGGATTACCGCCCGTTATTACCGGTAAATCCGGCTGATGCACTGGTTTCCCCGGAAGTTAACTTACCGGCCAATCTCCGGTCAGATATTTTACTGCAACGCCCGGATATTACCGAAGCCGAACACCTTTTGCTGGCAGCAAATGCCAATATCGGCGCTGCCCGCGCGGCATTTTTCCCGTCTGTTTCGCTGACCGGCGATATCTCCGGCAGCAGCAGTAACCTGGCTTCTGTACTCGATGCCGCTACCGGTATCTGGCGCTTTATCCCGAAAATCACTATTCCGGTATTTAATGGCGGGCGCAACAGCGCGAACCTGGCGCTGGCGGAGATCCGACAGGAAAAAGCGGTGGTTATCTATGAGCAGCGCATTCAGAACGCCTTTAAAGACGTCGCGGATGCACTGGCGCTGCGGAACAGTCTTGCACAACAGGTAGCGGCACAGACGCGATACGCCGCCTCACTGGATATCACATTACAACGCGCACAATTTCTTTTTGCCCGCGGGCAGAGCAGTTATCTCGATGTGCTGGATGCACAGCGGGCATTGCTGACCACGCGCCAAACCCTCGCCACACTGAAATATAACCAGAAAATAAATGAAATCACCCTGTTTGCCGCATTGGGCGGCGGATGGAAAGCCTGATCATCAACATTATACCCAACGTCATTCAAGATGCAGGCAGGCGGCAAGCT