Orthogroup:group_303


Homologs in group_303

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07995 FBDBKF_07995 Morganella morganii S1 tolC Outer membrane protein TolC
EHELCC_13825 EHELCC_13825 Morganella morganii S2 tolC Outer membrane protein TolC
NLDBIP_14270 NLDBIP_14270 Morganella morganii S4 tolC Outer membrane protein TolC
LHKJJB_08580 LHKJJB_08580 Morganella morganii S3 tolC Outer membrane protein TolC
HKOGLL_08130 HKOGLL_08130 Morganella morganii S5 tolC Outer membrane protein TolC
F4V73_RS03920 F4V73_RS03920 Morganella psychrotolerans - Cu(I)/Ag(I) efflux RND transporter outer membrane protein
F4V73_RS12990 F4V73_RS12990 Morganella psychrotolerans - TolC family outer membrane protein
PMI_RS01340 PMI_RS01340 Proteus mirabilis HI4320 - TolC family outer membrane protein

Distribution of group_303 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_303 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_303

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_303.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tolC 5
2 - 3

Product

# Product Occurence
1 Outer membrane protein TolC 5
2 Cu(I)/Ag(I) efflux RND transporter outer membrane protein 1
3 TolC family outer membrane protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1538 8 M Cell wall/membrane/envelope biogenesis (M) Outer membrane protein TolC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07796 1 outer membrane protein, copper/silver efflux system Two-component system -
K12538 1 outer membrane protein, type I secretion system - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02321 8 Outer membrane efflux protein

Annotations of the 36 SwissProt hits

Annotation Number of occurrences
Alkaline protease secretion protein AprF 1
Antibiotic efflux pump outer membrane protein ArpC 1
Cation efflux system protein CusC 3
Fusaric acid resistance protein FusA 1
Multidrug resistance outer membrane protein MdtP 4
Multidrug resistance outer membrane protein MdtQ 2
Multidrug/solvent efflux pump outer membrane protein MepC 1
Nodulation protein T 2
Outer membrane efflux protein BepC 1
Outer membrane protein OprJ 1
Outer membrane protein OprM 1
Outer membrane protein TolC 3
Probable efflux pump outer membrane protein SepC 1
Probable efflux pump outer membrane protein TtgC 1
Probable outer membrane lipoprotein SilC 1
Proteases secretion protein PrtF 1
Putative multidrug resistance outer membrane protein MdtQ 2
Pyoverdine export outer membrane protein OpmQ 2
Solvent efflux pump outer membrane protein SrpC 1
Toluene efflux pump outer membrane protein TtgC 1
Toluene efflux pump outer membrane protein TtgF 1
Toluene efflux pump outer membrane protein TtgI 1
Toxin and drug export protein A 1
Uncharacterized protein HI_1340 1
Uncharacterized protein HI_1462 1

Protein length

Min length 446
Max length 460
Mean length (sd) 448.9 (4.6)
Median length 447.0

Protein length distribution