Homologs in group_1882

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14070 FBDBKF_14070 87.6 Morganella morganii S1 menC o-succinylbenzoate synthase
EHELCC_08210 EHELCC_08210 87.6 Morganella morganii S2 menC o-succinylbenzoate synthase
NLDBIP_08535 NLDBIP_08535 87.6 Morganella morganii S4 menC o-succinylbenzoate synthase
LHKJJB_05730 LHKJJB_05730 87.6 Morganella morganii S3 menC o-succinylbenzoate synthase
HKOGLL_05185 HKOGLL_05185 87.6 Morganella morganii S5 menC o-succinylbenzoate synthase
PMI_RS08550 PMI_RS08550 68.7 Proteus mirabilis HI4320 menC o-succinylbenzoate synthase

Distribution of the homologs in the orthogroup group_1882

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1882

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N2K6 6.81e-164 462 70 0 319 3 menC o-succinylbenzoate synthase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JH91 8.66e-164 462 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
A7FGT5 8.95e-164 462 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B2K7Z0 4.28e-163 460 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A4TM05 6.02e-163 459 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pestis (strain Pestoides F)
Q1CHT2 6.02e-163 459 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R6I7 6.02e-163 459 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Angola)
P58487 6.02e-163 459 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pestis
Q1C6E0 6.02e-163 459 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Antiqua)
Q669D0 5.43e-162 457 70 0 320 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype I (strain IP32953)
B4EZ39 4.59e-161 455 68 0 322 3 menC o-succinylbenzoate synthase Proteus mirabilis (strain HI4320)
A1JKU9 1.71e-160 453 70 0 319 3 menC o-succinylbenzoate synthase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q6D7W1 1.21e-156 444 68 0 322 3 menC o-succinylbenzoate synthase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C6DBP5 2.89e-155 440 66 0 322 3 menC o-succinylbenzoate synthase Pectobacterium carotovorum subsp. carotovorum (strain PC1)
C5B7H9 3.52e-155 440 69 0 322 3 menC o-succinylbenzoate synthase Edwardsiella ictaluri (strain 93-146)
B7MXE4 1.99e-151 430 68 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O81 (strain ED1a)
Q1R9F3 3.08e-151 430 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain UTI89 / UPEC)
A1ADB3 3.08e-151 430 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O1:K1 / APEC
B7MG29 3.08e-151 430 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O45:K1 (strain S88 / ExPEC)
Q83QT6 8.99e-151 429 67 1 315 3 menC o-succinylbenzoate synthase Shigella flexneri
B1LLL6 4.3e-150 427 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain SMS-3-5 / SECEC)
Q0TFI0 8.02e-150 426 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7NNU1 1.5e-149 426 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q3YZU5 1.56e-149 426 66 1 317 3 menC o-succinylbenzoate synthase Shigella sonnei (strain Ss046)
B5YXQ5 2.92e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O157:H7 (strain EC4115 / EHEC)
P58484 2.92e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O157:H7
B5RCD1 3.18e-149 425 67 1 317 3 menC o-succinylbenzoate synthase Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R2Y7 3.18e-149 425 67 1 317 3 menC o-succinylbenzoate synthase Salmonella enteritidis PT4 (strain P125109)
B6I7K5 3.18e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain SE11)
B7M5U4 3.18e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O8 (strain IAI1)
B7LAS7 3.18e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain 55989 / EAEC)
A7ZP80 3.18e-149 425 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8FFL4 3.22e-149 425 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q32DS7 3.71e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Shigella dysenteriae serotype 1 (strain Sd197)
P29208 3.71e-149 424 66 1 317 1 menC o-succinylbenzoate synthase Escherichia coli (strain K12)
B1IXS5 3.71e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1X8X5 3.71e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain K12 / DH10B)
C4ZUA4 3.71e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli (strain K12 / MC4100 / BW2952)
P58485 8.25e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Salmonella typhi
B5EZI5 8.25e-149 424 66 1 317 3 menC o-succinylbenzoate synthase Salmonella agona (strain SL483)
B4TPI9 1.08e-148 423 66 1 317 3 menC o-succinylbenzoate synthase Salmonella schwarzengrund (strain CVM19633)
B5BCN9 1.38e-148 423 66 1 317 3 menC o-succinylbenzoate synthase Salmonella paratyphi A (strain AKU_12601)
Q5PN73 1.38e-148 423 66 1 317 3 menC o-succinylbenzoate synthase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
C0Q062 1.96e-148 423 66 1 317 3 menC o-succinylbenzoate synthase Salmonella paratyphi C (strain RKS4594)
P58486 2.41e-148 422 66 1 317 1 menC o-succinylbenzoate synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57M50 2.41e-148 422 66 1 317 3 menC o-succinylbenzoate synthase Salmonella choleraesuis (strain SC-B67)
B7N5M7 2.49e-148 422 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7UFS4 4.03e-148 422 67 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B4TBH3 4.49e-148 422 66 1 317 3 menC o-succinylbenzoate synthase Salmonella heidelberg (strain SL476)
A8A2C9 5.07e-148 422 66 1 317 3 menC o-succinylbenzoate synthase Escherichia coli O9:H4 (strain HS)
B2TW47 5.59e-148 422 66 1 317 3 menC o-succinylbenzoate synthase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B4SYX8 7.04e-148 421 66 1 317 3 menC o-succinylbenzoate synthase Salmonella newport (strain SL254)
Q31YJ6 1.28e-147 421 66 1 317 3 menC o-succinylbenzoate synthase Shigella boydii serotype 4 (strain Sb227)
A9MJB9 1.53e-147 421 66 1 317 3 menC o-succinylbenzoate synthase Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B7LM69 3e-146 417 65 1 317 3 menC o-succinylbenzoate synthase Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A8ADX2 3.31e-146 417 66 1 317 3 menC o-succinylbenzoate synthase Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5XNX3 1.95e-143 410 63 0 317 3 menC o-succinylbenzoate synthase Klebsiella pneumoniae (strain 342)
A4WCP6 2.47e-142 407 66 0 312 3 menC o-succinylbenzoate synthase Enterobacter sp. (strain 638)
B5FPE5 4.49e-142 407 66 1 317 3 menC o-succinylbenzoate synthase Salmonella dublin (strain CT_02021853)
A9N5A5 5.23e-140 401 66 1 317 3 menC o-succinylbenzoate synthase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B6EJ59 1.57e-134 387 57 2 323 3 menC o-succinylbenzoate synthase Aliivibrio salmonicida (strain LFI1238)
A6TBV5 5.14e-134 386 63 0 317 3 menC o-succinylbenzoate synthase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q9CLV7 9.41e-131 379 59 2 324 3 menC o-succinylbenzoate synthase Pasteurella multocida (strain Pm70)
B5FFK8 5.53e-130 376 57 2 315 3 menC o-succinylbenzoate synthase Aliivibrio fischeri (strain MJ11)
Q5E484 8.13e-129 373 57 2 315 3 menC o-succinylbenzoate synthase Aliivibrio fischeri (strain ATCC 700601 / ES114)
P44961 1.38e-120 352 54 2 316 3 menC o-succinylbenzoate synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
C3LNS3 2.98e-115 339 56 2 325 3 menC o-succinylbenzoate synthase Vibrio cholerae serotype O1 (strain M66-2)
Q9KQM6 2.98e-115 339 56 2 325 3 menC o-succinylbenzoate synthase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q15KI9 2.95e-11 68 25 11 310 2 PHYLLO Protein PHYLLO, chloroplastic Arabidopsis thaliana
Q8DJP8 1.84e-07 55 26 10 251 1 menC o-succinylbenzoate synthase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
F7ZLS5 1.12e-06 53 26 13 301 3 RLO149_c021500 Hydrophobic dipeptide epimerase Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)
Q55117 1.55e-06 52 25 13 308 3 menC o-succinylbenzoate synthase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q47Q21 1.74e-06 52 26 12 271 1 menC o-succinylbenzoate synthase Thermobifida fusca (strain YX)
P9WJP3 1.28e-05 49 26 13 281 1 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJP2 1.28e-05 49 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5TZT3 1.28e-05 49 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
C1AKN3 1.28e-05 49 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
A1KG30 1.28e-05 49 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain BCG / Pasteur 1173P2)
P65426 1.28e-05 49 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9WXM1 0.000354 45 25 15 301 1 TM_0006 L-Ala-D/L-Glu epimerase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P95608 0.000429 45 29 6 147 1 catB Muconate cycloisomerase 1 Rhodococcus opacus
A0QRG0 0.000729 44 29 8 216 3 menC o-succinylbenzoate synthase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02865
Feature type CDS
Gene menC
Product o-succinylbenzoate synthase
Location 606922 - 607893 (strand: 1)
Length 972 (nucleotides) / 323 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1882
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13378 Enolase C-terminal domain-like
PF21508 MenC, N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1441 Coenzyme transport and metabolism (H) H O-succinylbenzoate synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MRSATLYRFSLPMEAGVILRNQRLKTRDGLLVCLREAGREGRGEISPLPEFSHESLDDALSAAQAWIADWCSGSDPVESTLPSVAFGVSCALAELDNTLPETLSTRKAPLCTGDPDDLILALDAMSGDKIAKVKVGLYEAVRDGMVVNLLLEAVPDLRLRLDANRSWTRVKADGFAKYVAPEHRARIDFLEEPCKTPAESLDYARDTGIAIAWDESVREPGFVVQAQPGVAAIVIKPTLTGSITRCRELIDAAHSAGLQAVISSSVESSFGLTQLARLAGWLTPDTLPGLDTLSLMQSQLVRSWPDSPLPLITEDELTVTGQW

Flanking regions ( +/- flanking 50bp)

TTTAACGAAAAACGTGCGCCGGACTTCTCTAAATTTAAACGTAATCCGTAATGCGCAGCGCGACCTTATACCGGTTCAGCCTGCCGATGGAGGCAGGCGTTATTCTGCGCAATCAGCGCCTGAAAACCCGTGACGGACTGCTGGTCTGTCTGCGGGAAGCGGGGCGCGAAGGCCGGGGGGAAATCTCCCCGCTGCCGGAATTCAGTCATGAATCATTAGATGATGCGTTATCTGCCGCGCAGGCGTGGATAGCGGACTGGTGCAGCGGTTCAGACCCGGTTGAAAGCACACTGCCGAGTGTGGCTTTCGGCGTGAGTTGTGCGCTGGCAGAGCTGGACAACACATTGCCGGAGACGCTCAGCACCCGCAAAGCGCCACTGTGTACCGGCGACCCGGACGATCTGATCCTGGCGCTGGATGCGATGAGCGGTGATAAAATTGCCAAGGTCAAAGTCGGGCTGTATGAAGCAGTGCGGGACGGAATGGTGGTAAATCTGCTGCTGGAAGCGGTGCCTGATTTACGTCTGCGTCTGGATGCTAACCGCAGCTGGACCCGTGTGAAAGCAGATGGTTTTGCCAAATATGTGGCACCGGAACACCGCGCCCGGATTGATTTCCTCGAAGAGCCCTGTAAAACACCTGCCGAATCATTAGATTACGCACGGGATACCGGGATTGCGATTGCATGGGATGAATCTGTGCGGGAGCCGGGGTTTGTGGTTCAGGCACAACCGGGTGTGGCGGCGATTGTTATCAAACCGACACTGACCGGCAGCATCACGCGCTGCCGTGAACTGATTGATGCGGCACACAGTGCCGGTTTGCAGGCGGTAATCAGCTCTTCTGTTGAAAGCAGTTTCGGGCTGACACAACTTGCCCGTCTTGCCGGATGGCTGACACCGGACACCCTCCCGGGGCTGGATACACTGTCACTGATGCAGTCTCAGTTGGTTCGCTCCTGGCCGGACAGTCCGTTACCGCTTATTACTGAAGATGAACTAACCGTCACAGGACAATGGTAATGCCGACAGCAGAATGGCCGTGGGTTTCCCGCGCCTTGCAGGCACCGCAG