Homologs in group_1920

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14070 FBDBKF_14070 70.6 Morganella morganii S1 menC o-succinylbenzoate synthase
EHELCC_08210 EHELCC_08210 70.6 Morganella morganii S2 menC o-succinylbenzoate synthase
NLDBIP_08535 NLDBIP_08535 70.6 Morganella morganii S4 menC o-succinylbenzoate synthase
LHKJJB_05730 LHKJJB_05730 70.6 Morganella morganii S3 menC o-succinylbenzoate synthase
HKOGLL_05185 HKOGLL_05185 70.6 Morganella morganii S5 menC o-succinylbenzoate synthase
F4V73_RS02865 F4V73_RS02865 68.7 Morganella psychrotolerans menC o-succinylbenzoate synthase

Distribution of the homologs in the orthogroup group_1920

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1920

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4EZ39 0.0 657 100 0 323 3 menC o-succinylbenzoate synthase Proteus mirabilis (strain HI4320)
Q7N2K6 3.99e-176 493 72 0 322 3 menC o-succinylbenzoate synthase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B2K7Z0 2.99e-160 453 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A4TM05 4.43e-160 452 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pestis (strain Pestoides F)
Q1CHT2 4.43e-160 452 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R6I7 4.43e-160 452 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Angola)
P58487 4.43e-160 452 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pestis
Q1C6E0 4.43e-160 452 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pestis bv. Antiqua (strain Antiqua)
A7FGT5 1.4e-159 451 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1JH91 1.86e-159 451 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q669D0 4.46e-159 450 68 0 323 3 menC o-succinylbenzoate synthase Yersinia pseudotuberculosis serotype I (strain IP32953)
Q6D7W1 2.4e-157 445 67 0 322 3 menC o-succinylbenzoate synthase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C5B7H9 4.91e-156 442 67 0 322 3 menC o-succinylbenzoate synthase Edwardsiella ictaluri (strain 93-146)
A1JKU9 1.58e-155 441 66 0 322 3 menC o-succinylbenzoate synthase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
C6DBP5 2.29e-154 438 65 0 322 3 menC o-succinylbenzoate synthase Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q32DS7 1.21e-150 428 65 1 320 3 menC o-succinylbenzoate synthase Shigella dysenteriae serotype 1 (strain Sd197)
P29208 1.21e-150 428 65 1 320 1 menC o-succinylbenzoate synthase Escherichia coli (strain K12)
B1IXS5 1.21e-150 428 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1X8X5 1.21e-150 428 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain K12 / DH10B)
C4ZUA4 1.21e-150 428 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain K12 / MC4100 / BW2952)
B6I7K5 1.02e-149 426 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain SE11)
B7M5U4 1.02e-149 426 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O8 (strain IAI1)
B7LAS7 1.02e-149 426 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain 55989 / EAEC)
A7ZP80 1.02e-149 426 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8FFL4 1.15e-149 426 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q1R9F3 1.2e-149 426 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain UTI89 / UPEC)
A1ADB3 1.2e-149 426 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O1:K1 / APEC
B7MG29 1.2e-149 426 65 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O45:K1 (strain S88 / ExPEC)
A8A2C9 1.42e-149 426 65 2 321 3 menC o-succinylbenzoate synthase Escherichia coli O9:H4 (strain HS)
A4WCP6 1.97e-149 425 66 0 318 3 menC o-succinylbenzoate synthase Enterobacter sp. (strain 638)
Q3YZU5 2.17e-149 425 65 2 320 3 menC o-succinylbenzoate synthase Shigella sonnei (strain Ss046)
B7MXE4 3.71e-149 424 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O81 (strain ED1a)
B5YXQ5 4.05e-149 424 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O157:H7 (strain EC4115 / EHEC)
P58484 4.05e-149 424 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O157:H7
Q5E484 5.09e-149 424 63 1 323 3 menC o-succinylbenzoate synthase Aliivibrio fischeri (strain ATCC 700601 / ES114)
B7NNU1 7.23e-149 424 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7N5M7 1e-148 423 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1LLL6 1.11e-148 423 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli (strain SMS-3-5 / SECEC)
B6EJ59 1.16e-148 423 63 1 323 3 menC o-succinylbenzoate synthase Aliivibrio salmonicida (strain LFI1238)
B2TW47 1.49e-148 423 64 1 320 3 menC o-succinylbenzoate synthase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q83QT6 1.61e-148 423 66 1 312 3 menC o-succinylbenzoate synthase Shigella flexneri
Q0TFI0 1.72e-148 423 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q31YJ6 2.41e-148 422 64 1 320 3 menC o-succinylbenzoate synthase Shigella boydii serotype 4 (strain Sb227)
B7LM69 8.95e-148 421 64 1 320 3 menC o-succinylbenzoate synthase Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7UFS4 9.05e-148 421 64 1 320 3 menC o-succinylbenzoate synthase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B5FFK8 1.05e-147 421 62 1 323 3 menC o-succinylbenzoate synthase Aliivibrio fischeri (strain MJ11)
B5XNX3 3.09e-147 420 64 0 318 3 menC o-succinylbenzoate synthase Klebsiella pneumoniae (strain 342)
B4SYX8 1.05e-146 418 64 1 320 3 menC o-succinylbenzoate synthase Salmonella newport (strain SL254)
P58486 2.55e-146 417 64 1 320 1 menC o-succinylbenzoate synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57M50 2.55e-146 417 64 1 320 3 menC o-succinylbenzoate synthase Salmonella choleraesuis (strain SC-B67)
B5EZI5 3.46e-146 417 64 1 320 3 menC o-succinylbenzoate synthase Salmonella agona (strain SL483)
B4TBH3 7.2e-146 416 64 1 320 3 menC o-succinylbenzoate synthase Salmonella heidelberg (strain SL476)
B5RCD1 8.03e-146 416 63 1 320 3 menC o-succinylbenzoate synthase Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R2Y7 8.03e-146 416 63 1 320 3 menC o-succinylbenzoate synthase Salmonella enteritidis PT4 (strain P125109)
C0Q062 1.11e-145 416 64 1 320 3 menC o-succinylbenzoate synthase Salmonella paratyphi C (strain RKS4594)
A8ADX2 1.4e-145 416 63 1 318 3 menC o-succinylbenzoate synthase Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5BCN9 1.62e-145 415 64 1 320 3 menC o-succinylbenzoate synthase Salmonella paratyphi A (strain AKU_12601)
Q5PN73 1.62e-145 415 64 1 320 3 menC o-succinylbenzoate synthase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P58485 1.71e-145 415 63 1 320 3 menC o-succinylbenzoate synthase Salmonella typhi
B4TPI9 3.55e-145 414 63 1 320 3 menC o-succinylbenzoate synthase Salmonella schwarzengrund (strain CVM19633)
A9MJB9 2.9e-144 412 63 1 320 3 menC o-succinylbenzoate synthase Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5FPE5 2.25e-138 397 63 1 320 3 menC o-succinylbenzoate synthase Salmonella dublin (strain CT_02021853)
A9N5A5 5.33e-138 396 63 1 320 3 menC o-succinylbenzoate synthase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q9CLV7 9.35e-137 394 59 2 324 3 menC o-succinylbenzoate synthase Pasteurella multocida (strain Pm70)
A6TBV5 1e-136 393 63 0 318 3 menC o-succinylbenzoate synthase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
C3LNS3 3.47e-121 354 56 2 327 3 menC o-succinylbenzoate synthase Vibrio cholerae serotype O1 (strain M66-2)
Q9KQM6 3.47e-121 354 56 2 327 3 menC o-succinylbenzoate synthase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P44961 1.99e-119 349 53 2 319 3 menC o-succinylbenzoate synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q15KI9 4.08e-14 77 26 13 315 2 PHYLLO Protein PHYLLO, chloroplastic Arabidopsis thaliana
Q55117 8.82e-10 62 25 9 302 3 menC o-succinylbenzoate synthase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q47Q21 1.85e-09 61 23 10 274 1 menC o-succinylbenzoate synthase Thermobifida fusca (strain YX)
A0QRG0 8.68e-08 56 25 11 286 3 menC o-succinylbenzoate synthase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Q9CBB2 1.09e-06 53 26 13 281 3 menC o-succinylbenzoate synthase Mycobacterium leprae (strain TN)
Q8DJP8 5.64e-06 50 29 8 204 1 menC o-succinylbenzoate synthase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
P9WJP3 5.93e-06 50 25 13 278 1 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJP2 5.93e-06 50 25 13 278 3 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5TZT3 5.93e-06 50 25 13 278 3 menC o-succinylbenzoate synthase Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
C1AKN3 5.93e-06 50 25 13 278 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
A1KG30 5.93e-06 50 25 13 278 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain BCG / Pasteur 1173P2)
P65426 5.93e-06 50 25 13 278 3 menC o-succinylbenzoate synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O34508 1.67e-05 49 26 11 275 1 ykfB L-Ala-D/L-Glu epimerase Bacillus subtilis (strain 168)
Q9WXM1 4.55e-05 48 24 12 296 1 TM_0006 L-Ala-D/L-Glu epimerase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
F7ZLS5 7.91e-05 47 24 13 307 3 RLO149_c021500 Hydrophobic dipeptide epimerase Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)
Q6ARP5 0.000171 46 23 8 247 1 menC o-succinylbenzoate synthase Desulfotalea psychrophila (strain LSv54 / DSM 12343)
B2HRP4 0.000327 45 25 12 272 3 menC o-succinylbenzoate synthase Mycobacterium marinum (strain ATCC BAA-535 / M)
Q834W6 0.000503 45 29 9 174 1 EF_1511 Hydrophobic dipeptide epimerase Enterococcus faecalis (strain ATCC 700802 / V583)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08550
Feature type CDS
Gene menC
Product o-succinylbenzoate synthase
Location 1864936 - 1865907 (strand: -1)
Length 972 (nucleotides) / 323 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1920
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13378 Enolase C-terminal domain-like
PF21508 MenC, N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1441 Coenzyme transport and metabolism (H) H O-succinylbenzoate synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MRNAKLYSFSLPMEAGVVLRYQRLKTRDGFLVCLEQNGKQGWGEISPLPEFSHETLEQAQDAAQSWLAAWCLGENPTDSELPSVAFGISCALAELEGTLPEEANYRAAPLCNGDPDDLILSLNEMSGEKVAKVKVGLYEAVRDGIVVNLLLEAIPDLKLRLDANRSWTPAKAEGFAKYVNPQWRDRIAFLEEPCKTPEESLAFSQATGINIAWDETVRDEGFEVKAQEGVTAIVIKPTLVGSLARCQSIVEQAHALGLEAIISSSIESSFGLTQLARVAQWLTPDSIPGLDTVDLIKQQLIRCWPDVDIPLITLEQLKTVWQQ

Flanking regions ( +/- flanking 50bp)

TTTAATGAAAAACGTCATCCTGATTTCACTAAATTTAAACGTAACCCATAATGCGAAACGCCAAACTCTATTCATTCAGCCTGCCAATGGAGGCAGGTGTTGTTCTGCGCTACCAAAGATTAAAAACGCGTGATGGTTTTCTTGTCTGTTTAGAGCAAAATGGCAAACAAGGTTGGGGTGAAATTTCACCTCTTCCTGAGTTTAGCCATGAAACGTTAGAACAAGCACAAGATGCCGCACAATCTTGGCTAGCAGCTTGGTGTCTAGGTGAAAATCCTACTGACAGTGAATTGCCAAGTGTCGCTTTTGGTATTAGTTGCGCATTAGCAGAGCTTGAAGGCACTTTACCAGAAGAAGCCAATTATCGTGCCGCACCTTTATGCAACGGTGATCCTGATGACTTAATTTTAAGTCTTAATGAAATGAGCGGGGAGAAAGTTGCTAAAGTTAAGGTCGGTCTGTATGAAGCGGTACGAGATGGTATTGTCGTCAACTTATTACTAGAGGCGATCCCCGACTTAAAACTAAGGCTTGATGCCAATCGCAGTTGGACGCCAGCTAAAGCAGAAGGTTTTGCCAAGTACGTGAACCCACAATGGCGCGACCGCATTGCATTTTTAGAAGAGCCATGCAAAACCCCAGAAGAGTCACTCGCCTTTTCACAAGCAACAGGTATCAATATTGCTTGGGATGAGACTGTGCGTGATGAAGGTTTTGAAGTGAAAGCTCAAGAGGGTGTTACGGCGATTGTTATCAAGCCTACGCTAGTAGGAAGTCTTGCTCGTTGCCAATCTATCGTTGAACAAGCGCATGCTTTAGGTCTAGAGGCGATTATTAGCTCGAGTATTGAAAGTAGCTTTGGATTGACACAACTGGCAAGAGTAGCTCAGTGGTTAACACCAGATTCTATTCCCGGTTTAGATACCGTTGATCTTATCAAACAACAACTTATTCGTTGTTGGCCAGATGTAGATATTCCGCTTATTACGCTTGAACAGCTTAAGACAGTATGGCAACAGTAGTTAATTTTACACAATGGCCGTGGCATCACTGGGCGCAGCTTAACCCAAAT