Orthogroup:group_1882


Homologs in group_1882

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14070 FBDBKF_14070 Morganella morganii S1 menC o-succinylbenzoate synthase
EHELCC_08210 EHELCC_08210 Morganella morganii S2 menC o-succinylbenzoate synthase
NLDBIP_08535 NLDBIP_08535 Morganella morganii S4 menC o-succinylbenzoate synthase
LHKJJB_05730 LHKJJB_05730 Morganella morganii S3 menC o-succinylbenzoate synthase
HKOGLL_05185 HKOGLL_05185 Morganella morganii S5 menC o-succinylbenzoate synthase
F4V73_RS02865 F4V73_RS02865 Morganella psychrotolerans menC o-succinylbenzoate synthase
PMI_RS08550 PMI_RS08550 Proteus mirabilis HI4320 menC o-succinylbenzoate synthase

Distribution of group_1882 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1882 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1882

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1882.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 menC 7

Product

# Product Occurence
1 o-succinylbenzoate synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1441 7 H Coenzyme transport and metabolism (H) O-succinylbenzoate synthase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13378 7 Enolase C-terminal domain-like
PF21508 7 MenC, N-terminal domain

Annotations of the 88 SwissProt hits

Annotation Number of occurrences
Hydrophobic dipeptide epimerase 3
L-Ala-D/L-Glu epimerase 2
Muconate cycloisomerase 1 1
Protein PHYLLO, chloroplastic 1
o-succinylbenzoate synthase 81

Protein length

Unique protein length 323

Protein length distribution