Homologs in group_1895

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14145 FBDBKF_14145 98.0 Morganella morganii S1 nuoF NADH-quinone oxidoreductase subunit NuoF
EHELCC_08135 EHELCC_08135 98.0 Morganella morganii S2 nuoF NADH-quinone oxidoreductase subunit NuoF
NLDBIP_08460 NLDBIP_08460 98.0 Morganella morganii S4 nuoF NADH-quinone oxidoreductase subunit NuoF
LHKJJB_05805 LHKJJB_05805 98.0 Morganella morganii S3 nuoF NADH-quinone oxidoreductase subunit NuoF
HKOGLL_05110 HKOGLL_05110 98.0 Morganella morganii S5 nuoF NADH-quinone oxidoreductase subunit NuoF
PMI_RS08625 PMI_RS08625 88.0 Proteus mirabilis HI4320 nuoF NADH-quinone oxidoreductase subunit NuoF

Distribution of the homologs in the orthogroup group_1895

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31979 0.0 822 88 2 448 1 nuoF NADH-quinone oxidoreductase subunit F Escherichia coli (strain K12)
P33901 0.0 819 88 2 448 3 nuoF NADH-quinone oxidoreductase subunit F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9I0J7 0.0 709 79 1 429 3 nuoF NADH-quinone oxidoreductase subunit F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8K9Y3 0.0 657 70 2 443 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57256 0.0 639 67 2 443 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AU2 0.0 609 67 2 423 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P56913 3.8e-137 403 49 3 414 3 nuoF2 NADH-quinone oxidoreductase subunit F 2 Rhizobium meliloti (strain 1021)
Q56222 9.42e-135 397 50 6 401 1 nqo1 NADH-quinone oxidoreductase subunit 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q9XAQ9 1.58e-131 390 47 5 415 3 nuoF NADH-quinone oxidoreductase subunit F Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P9WIV7 2.84e-131 389 47 6 420 1 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIV6 2.84e-131 389 47 6 420 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65568 2.84e-131 389 47 6 420 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O66841 1.46e-111 338 46 7 397 1 nuoF NADH-quinone oxidoreductase subunit F Aquifex aeolicus (strain VF5)
Q68XY3 3.44e-108 329 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q92JB2 3.63e-108 329 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P29913 3.83e-108 329 43 4 396 1 nqo1 NADH-quinone oxidoreductase chain 1 Paracoccus denitrificans
A8GQT6 4.56e-108 329 44 4 387 2 nuoF NADH-quinone oxidoreductase subunit F Rickettsia rickettsii (strain Sheila Smith)
Q46507 5.65e-108 331 41 5 404 1 hndC NADP-reducing hydrogenase subunit HndC Solidesulfovibrio fructosivorans
Q9ZE33 8.92e-108 328 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia prowazekii (strain Madrid E)
A8F0M0 5.15e-107 326 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia massiliae (strain Mtu5)
Q4UKA6 1.39e-106 325 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RHA0 1.74e-105 322 43 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain RML369-C)
A8GYE0 1.74e-105 322 43 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain OSU 85-389)
O07948 2.1e-105 322 41 7 418 3 nuoF NADH-quinone oxidoreductase subunit F Rhodobacter capsulatus
A8EXI1 4.26e-105 321 43 5 390 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia canadensis (strain McKiel)
Q54I90 9.24e-105 322 43 6 404 2 ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Dictyostelium discoideum
O52682 2.04e-104 326 43 3 400 1 hydB Bifurcating [FeFe] hydrogenase beta subunit Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q0MQI5 1.15e-103 319 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Gorilla gorilla gorilla
Q0MQI4 1.35e-103 319 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pongo pygmaeus
P25708 1.64e-103 318 44 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Bos taurus
Q91YT0 2.17e-103 318 44 5 395 1 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Mus musculus
A8GM77 2.29e-103 317 42 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia akari (strain Hartford)
P24917 2.57e-103 319 44 5 383 2 nuo-51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q0MQI6 2.78e-103 318 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pan troglodytes
Q8HXQ9 3.41e-103 318 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Macaca fascicularis
P49821 1.07e-102 317 44 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Homo sapiens
Q9FNN5 2.41e-101 314 43 5 399 1 At5g08530 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Arabidopsis thaliana
P56912 3.01e-101 312 44 5 380 3 nuoF1 NADH-quinone oxidoreductase subunit F 1 Rhizobium meliloti (strain 1021)
Q92406 4.47e-98 306 42 5 383 3 NUO51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Aspergillus niger
P22317 3.77e-73 244 39 8 332 1 hoxF NAD-reducing hydrogenase HoxS subunit alpha Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O94500 1.28e-64 218 33 6 403 3 SPBC18E5.10 NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
H6LC32 1.94e-06 53 24 7 270 1 rnfC Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
A8AH10 7.61e-05 48 28 2 129 3 rnfC Ion-translocating oxidoreductase complex subunit C Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
D5ARZ1 0.000102 48 24 4 189 3 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q52716 0.000102 48 24 4 189 1 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus
A5UBJ0 0.000194 47 25 4 156 3 rnfC Ion-translocating oxidoreductase complex subunit C Haemophilus influenzae (strain PittEE)
A0A0H3AJC2 0.000196 47 33 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KT88 0.000203 47 33 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q7VNT4 0.000208 47 29 4 148 3 rnfC Ion-translocating oxidoreductase complex subunit C Haemophilus ducreyi (strain 35000HP / ATCC 700724)
B1LEQ7 0.00023 47 25 4 166 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli (strain SMS-3-5 / SECEC)
B7NB83 0.000317 47 26 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7NU04 0.000352 47 25 4 166 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B2U2C8 0.000431 46 30 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
D8GR66 0.000487 46 23 11 272 2 rnfC Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)
Q65U33 0.000557 46 26 1 101 3 rnfC Ion-translocating oxidoreductase complex subunit C Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q4QJQ6 0.000582 46 24 3 150 3 rnfC Ion-translocating oxidoreductase complex subunit C Haemophilus influenzae (strain 86-028NP)
B7URX0 0.000715 45 25 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q8FH95 0.00076 45 25 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A9MRW8 0.001 45 30 1 103 3 rsxC Ion-translocating oxidoreductase complex subunit C Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q83RB9 0.001 45 28 3 131 3 rsxC Ion-translocating oxidoreductase complex subunit C Shigella flexneri
Q0T4E8 0.001 45 28 3 131 3 rsxC Ion-translocating oxidoreductase complex subunit C Shigella flexneri serotype 5b (strain 8401)
Q1RBG7 0.001 45 25 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli (strain UTI89 / UPEC)
B7M0I6 0.001 45 29 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O8 (strain IAI1)
B7MVA7 0.001 45 25 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O81 (strain ED1a)
B7L5I2 0.001 45 29 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli (strain 55989 / EAEC)
B7M9Y3 0.001 45 25 4 161 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O45:K1 (strain S88 / ExPEC)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02790
Feature type CDS
Gene nuoF
Product NADH-quinone oxidoreductase subunit NuoF
Location 588293 - 589645 (strand: 1)
Length 1353 (nucleotides) / 450 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1895
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit
PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1894 Energy production and conversion (C) C NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00335 NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Protein Sequence

MTVKTVCRTAETHPLTWRLRDDHQPVWLDEYRSKNGYAGAERALKGMAPDEIVNLVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEELPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAKHLRHAIEEAKAAGLLGKNILGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPASSGAWGKPTCVNNVETLCNVPAILAHGKEWYTGLSEGKSADAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLTLKAWQPGGAGTDFLTQDHLDLPMDFEHIGKAGSRLGTALAMAVDNEINMVSLTRNLEEFFARESCGWCTPCRDGLPWSVKILRAIEKGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRDEFEAGIVQPVYANVQTIAGIQPNLLKQRW

Flanking regions ( +/- flanking 50bp)

CACAGTCACGTCACCCCGGAGGCTATTGAAACGTTACTGGAGCAGTATCCATGACAGTGAAAACGGTTTGCCGTACGGCGGAAACGCACCCGCTTACCTGGCGGCTGCGTGATGATCACCAGCCGGTGTGGCTGGATGAATACCGCAGCAAAAATGGTTACGCGGGTGCTGAGCGCGCACTGAAAGGCATGGCACCGGATGAGATAGTCAATCTTGTCAAAGACGCGGGTCTGAAGGGTCGCGGCGGTGCGGGCTTCTCCACAGGTCTGAAGTGGAGTCTGATGCCGAAAGACGAAAGCATGAATATCCGCTATCTGCTGTGTAACGCCGACGAAATGGAGCCGGGGACTTACAAAGACCGGTTACTGATGGAAGAACTGCCGCACCTGCTGGTGGAAGGCATGCTGATCAGCGCCTTTGCCCTGAAAGCATACCGTGGCTATATCTTCCTGCGCGGTGAATACATTGAAGCGGCGAAGCATCTGCGCCATGCAATTGAAGAAGCGAAAGCCGCCGGGCTGCTGGGGAAAAATATCCTCGGCACCGGGTTTGATTTCGAATTATTTGTCCATACCGGCGCCGGGCGTTATATCTGCGGGGAAGAAACCGCACTGATTAACTCCCTCGAAGGCCGCCGCGCCAATCCGCGCTCCAAACCACCTTTCCCTGCAAGCTCCGGTGCCTGGGGTAAACCGACCTGTGTAAACAACGTCGAAACCCTGTGCAATGTCCCGGCAATCCTTGCCCACGGCAAAGAGTGGTACACCGGGCTGAGCGAAGGCAAAAGTGCGGATGCAGGCACCAAACTGATGGGCTTTTCCGGTCGCGTAAAAAATCCGGGTCTGTGGGAACTGCCGTTCGGCACAACCGCCCGTGAGATCCTGGAAGACTACGCCGGTGGCATGCGTGACGGGTTAACCCTGAAAGCCTGGCAGCCTGGCGGGGCAGGAACGGATTTCCTGACACAGGATCATCTTGATTTACCGATGGATTTTGAACATATCGGCAAAGCCGGCAGCCGTCTCGGGACAGCACTGGCAATGGCGGTGGATAATGAAATCAATATGGTGTCGCTGACCCGTAACCTCGAAGAATTTTTTGCCCGTGAATCCTGCGGCTGGTGTACACCGTGCCGTGACGGACTGCCATGGAGTGTGAAAATTTTGCGCGCAATAGAAAAAGGGGAAGGGCAGCCCGGAGACATTGAGACATTAGAGCAATTATGTCGTTTCCTAGGTCCCGGTAAAACCTTCTGCGCACACGCGCCGGGCGCGGTAGAGCCGTTACAGAGTGCAATCAAATATTTCCGTGATGAATTTGAAGCAGGGATTGTACAGCCGGTTTACGCCAATGTGCAGACCATCGCCGGGATCCAGCCGAACCTGCTGAAACAGCGTTGGTGATCCCTTACGGATTTTCGTTTAACGCCTGCAATGCAGGCCTTTTGGAAGCA