Homologs in group_1902

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14185 FBDBKF_14185 93.6 Morganella morganii S1 citT Di- and tricarboxylate antiporter
EHELCC_08095 EHELCC_08095 93.6 Morganella morganii S2 citT Di- and tricarboxylate antiporter
NLDBIP_08420 NLDBIP_08420 93.6 Morganella morganii S4 citT Di- and tricarboxylate antiporter
LHKJJB_05845 LHKJJB_05845 93.6 Morganella morganii S3 citT Di- and tricarboxylate antiporter
HKOGLL_05070 HKOGLL_05070 93.6 Morganella morganii S5 citT Di- and tricarboxylate antiporter
PMI_RS08665 PMI_RS08665 81.6 Proteus mirabilis HI4320 - SLC13 family permease

Distribution of the homologs in the orthogroup group_1902

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1902

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFU2 0.0 868 71 1 610 3 yfbS Uncharacterized transporter YfbS Escherichia coli (strain K12)
P0AFU3 0.0 868 71 1 610 3 yfbS Uncharacterized transporter YfbS Escherichia coli O157:H7
P72958 1.32e-70 242 28 9 620 3 sll0640 Uncharacterized transporter sll0640 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q39593 3.74e-32 134 27 18 611 2 SAC1 Putative sulfur deprivation response regulator Chlamydomonas reinhardtii
D2K6F1 1.12e-21 103 26 7 292 2 SLT2 Sodium/sulfate cotransporter 2 Chlamydomonas reinhardtii
D2K6F1 1.72e-15 84 23 11 396 2 SLT2 Sodium/sulfate cotransporter 2 Chlamydomonas reinhardtii
A8IHV3 1.86e-19 96 24 12 372 2 SLT3 Probable sodium/sulfate cotransporter 3 Chlamydomonas reinhardtii
A8IHV3 2.11e-19 96 26 7 289 2 SLT3 Probable sodium/sulfate cotransporter 3 Chlamydomonas reinhardtii
A8IJF8 7.44e-17 88 23 12 410 2 SLT1 Sodium/sulfate cotransporter 1 Chlamydomonas reinhardtii
A8IJF8 9.49e-17 87 24 5 285 2 SLT1 Sodium/sulfate cotransporter 1 Chlamydomonas reinhardtii
Q57486 8.53e-10 65 28 3 166 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57486 9.41e-05 48 30 5 149 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8WWT9 3.82e-08 60 28 4 150 1 SLC13A3 Na(+)/dicarboxylate cotransporter 3 Homo sapiens
Q8WWT9 0.000238 47 28 1 104 1 SLC13A3 Na(+)/dicarboxylate cotransporter 3 Homo sapiens
Q9Z0Z5 2.67e-07 57 28 4 150 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Rattus norvegicus
Q91Y63 4.89e-07 56 28 4 150 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Mus musculus
Q91Y63 0.000727 46 28 1 107 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Mus musculus
Q49YW0 4.4e-06 53 27 2 136 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q67BT3 6.53e-06 52 29 2 141 1 Slc13a5 Na(+)/citrate cotransporter Mus musculus
Q58086 6.53e-06 52 27 4 166 3 MJ0672 Uncharacterized transporter MJ0672 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P9WPD8 1.08e-05 52 27 5 192 3 MT2758 Uncharacterized transporter MT2758 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P46556 1.19e-05 52 27 0 135 3 B0285.6 Uncharacterized transporter B0285.6 Caenorhabditis elegans
P0A607 1.27e-05 51 27 5 192 3 BQ2027_MB2703 Uncharacterized transporter Mb2703 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPD9 1.27e-05 51 27 5 192 3 Rv2684 Uncharacterized transporter Rv2684 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q86YT5 1.41e-05 51 28 2 136 1 SLC13A5 Na(+)/citrate cotransporter Homo sapiens
Q8LG88 1.44e-05 51 26 2 130 2 TDT Tonoplast dicarboxylate transporter Arabidopsis thaliana
Q9UKG4 2.73e-05 50 27 2 136 1 SLC13A4 Solute carrier family 13 member 4 Homo sapiens
P46838 3.15e-05 50 29 4 175 3 ag45 46 kDa membrane protein Mycobacterium leprae (strain TN)
Q9LXV3 3.41e-05 50 35 2 126 1 DIT1 Dicarboxylate transporter 1, chloroplastic Arabidopsis thaliana
P9WPD7 8.7e-05 48 27 6 181 1 Rv2685 Uncharacterized transporter Rv2685 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPD6 8.7e-05 48 27 6 181 3 MT2759 Uncharacterized transporter MT2759 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q41364 0.000141 48 34 2 123 1 DIT1 Dicarboxylate transporter 1, chloroplastic Spinacia oleracea
Q8CJ44 0.000165 48 29 0 106 1 Slc13a5 Na(+)/citrate cotransporter Rattus norvegicus
P25360 0.000187 48 26 4 166 1 PHO87 Inorganic phosphate transporter PHO87 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6GFE0 0.000232 47 23 2 164 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MRSA252)
O34726 0.000233 47 26 4 171 2 yflS Putative malate transporter YflS Bacillus subtilis (strain 168)
Q7A4P8 0.000264 47 23 2 164 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain N315)
Q99SX1 0.000264 47 23 2 164 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HEK4 0.000264 47 23 2 164 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain COL)
Q2FWY4 0.000264 47 23 2 164 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FFH9 0.000269 47 22 4 197 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain USA300)
Q8NVS5 0.000328 47 22 1 157 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MW2)
Q6G816 0.000328 47 22 1 157 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MSSA476)
Q2YU56 0.000339 47 22 1 157 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q93655 0.000832 46 30 0 78 2 nac-1 Sodium-dependent low-affinity dicarboxylate transporter 1 Caenorhabditis elegans
P32739 0.001 45 28 1 118 2 nac-2 Sodium-dependent high-affinity dicarboxylate transporter 2 Caenorhabditis elegans

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02745
Feature type CDS
Gene -
Product SLC13 family permease
Location 578109 - 579938 (strand: 1)
Length 1830 (nucleotides) / 609 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1902
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02080 TrkA-C domain
PF03600 Citrate transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0471 Carbohydrate transport and metabolism (G) G Di- and tricarboxylate antiporter

Protein Sequence

MNTELAWVLTLLFIAIVLFTTNKVRMDVVALLVIIAFVLSGTLTLTEAVAGFSDPNILLIAALFVIGEGLVRTGVAYQMGDWLVRVAGSGETKLLVFLMVSVAGLGAFMSSTGVVAIFIPVVLSVSARMKISPSRLMMPLGFAGLISGMMTLVATPPNMVVNSLLETEGIKGFNFFSITPIGILVLLAGVAYMLVARHWLGSNQPEKAGDGVQRTFRDLIRDYKLSGRARRLAVRNGSPLIGKTLDELHLRTRYGANIVGIERWRHFRRVMVGATGGMELRDRDVLLIDMSAGDTDLREFCAEQMLEPMILRGEYFSEQARNVGMAEVSLNPESELIGKGLRDIGFRTRYGLNVLGVRREGKALSGNIVDEPLQLGDILLVVGDWKLIRILATKRRHFIVLNLAAEVETVVPAASQAPHALFCLALMVAMMVTNEIPNFIAALIACLLMGKFRCIDMESAYRSIHWPSIILIVGMMPFALALQKTGGITLIVKGLMDVAGNMGPHVMLTALFILCATIGLFISNTATAVLMAPIAIQAAYEMQVSPLPFAMVVGVAASAAFMTPVSSPVNTLILGPGHYTFSDFVKIGVPFTFVVMLISIAVIPLLFPF

Flanking regions ( +/- flanking 50bp)

ACTGTGAGACAGGATGTTGGCTGTCCGGGCATTGACGAAAGAGGTCGTTGGTGAATACGGAACTTGCGTGGGTATTAACCCTGCTTTTTATTGCCATTGTTTTATTTACCACCAACAAAGTCCGGATGGATGTTGTGGCGCTGTTGGTGATCATCGCATTCGTACTCAGTGGTACGCTTACCTTAACTGAAGCCGTTGCCGGCTTTAGTGATCCCAATATTCTGCTGATTGCCGCCCTGTTTGTCATCGGGGAGGGATTAGTGCGCACCGGTGTTGCCTACCAGATGGGCGACTGGCTGGTGCGCGTTGCAGGCTCCGGTGAAACAAAACTGCTGGTTTTCCTGATGGTGAGTGTGGCGGGGCTGGGCGCGTTTATGAGCTCAACCGGTGTGGTCGCTATTTTTATCCCTGTGGTACTGAGTGTTTCTGCCCGCATGAAGATCTCTCCCTCCCGGCTGATGATGCCGCTCGGCTTTGCCGGGCTTATCAGCGGAATGATGACGCTGGTTGCCACGCCACCGAATATGGTCGTGAACAGTCTTCTGGAAACGGAAGGGATCAAAGGTTTTAATTTCTTCTCAATTACCCCGATCGGCATACTGGTTTTACTCGCGGGTGTCGCTTATATGCTGGTTGCCCGGCACTGGCTGGGCAGTAACCAGCCGGAAAAAGCAGGTGATGGCGTGCAGCGCACATTCCGCGACCTTATCCGTGATTACAAACTGAGCGGACGCGCCCGGCGTCTGGCTGTCCGCAACGGCTCACCGCTTATCGGTAAAACACTCGATGAACTTCATCTGCGCACCCGCTACGGTGCCAATATTGTGGGGATCGAGCGTTGGCGGCATTTTCGCCGCGTGATGGTCGGTGCAACCGGAGGTATGGAACTGCGTGACCGCGATGTTCTGCTGATTGATATGTCCGCCGGTGATACAGATTTGCGTGAGTTCTGTGCTGAGCAAATGCTGGAGCCGATGATCCTGCGCGGCGAATATTTCTCGGAGCAGGCACGTAATGTGGGAATGGCGGAAGTCTCCCTGAATCCGGAAAGTGAATTAATCGGAAAAGGTCTGCGCGATATCGGGTTTCGTACCCGTTACGGGCTGAATGTGCTCGGGGTGCGCCGCGAAGGAAAAGCCCTCAGCGGCAATATTGTGGATGAGCCTCTGCAACTGGGGGATATCCTGCTGGTGGTCGGTGACTGGAAACTTATCCGCATACTTGCCACCAAGCGCCGCCACTTTATTGTCCTCAACCTTGCCGCAGAGGTTGAAACAGTGGTTCCGGCAGCGTCACAGGCACCGCATGCCCTGTTTTGTCTTGCTCTGATGGTGGCGATGATGGTGACAAATGAGATCCCGAATTTCATTGCGGCGCTGATAGCCTGCCTGCTGATGGGGAAATTCCGCTGTATTGATATGGAGAGCGCATACCGCAGCATACACTGGCCGAGTATTATTTTGATCGTCGGGATGATGCCGTTTGCCCTGGCATTACAAAAAACCGGCGGGATCACGCTGATAGTTAAAGGGCTGATGGATGTGGCGGGGAACATGGGACCGCATGTGATGCTGACAGCCCTGTTTATATTGTGTGCCACCATCGGGTTGTTTATTTCGAATACGGCGACAGCCGTACTGATGGCACCGATTGCTATTCAGGCGGCGTATGAAATGCAGGTTTCACCGCTGCCGTTTGCGATGGTGGTGGGCGTCGCGGCTTCAGCCGCCTTTATGACACCGGTTTCTTCACCGGTAAATACGCTGATACTCGGTCCCGGGCATTATACATTCAGCGATTTTGTCAAAATCGGGGTGCCGTTTACCTTTGTGGTGATGCTTATCAGTATTGCGGTTATCCCGTTACTGTTCCCGTTCTGACGGAGTTCCCTGATGAAAACGCAACTGCCAATGATCCGGGGTGGTTTCAA