Homologs in group_560

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01420 FBDBKF_01420 90.9 Morganella morganii S1 lepB signal peptidase I
EHELCC_00125 EHELCC_00125 90.9 Morganella morganii S2 lepB signal peptidase I
NLDBIP_03335 NLDBIP_03335 90.9 Morganella morganii S4 lepB signal peptidase I
LHKJJB_04850 LHKJJB_04850 90.9 Morganella morganii S3 lepB signal peptidase I
HKOGLL_02195 HKOGLL_02195 90.9 Morganella morganii S5 lepB signal peptidase I
PMI_RS09325 PMI_RS09325 65.8 Proteus mirabilis HI4320 lepB signal peptidase I

Distribution of the homologs in the orthogroup group_560

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_560

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00803 1.74e-132 383 59 4 329 1 lepB Signal peptidase I Escherichia coli (strain K12)
P0A1W2 7.09e-129 374 58 4 329 3 lepB Signal peptidase I Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1W3 7.09e-129 374 58 4 329 3 lepB Signal peptidase I Salmonella typhi
P57347 7.56e-94 284 44 7 333 3 lepB Signal peptidase I Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9R0 1.02e-86 266 43 8 329 3 lepB Signal peptidase I Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44454 6.76e-78 244 38 7 351 3 lepB Signal peptidase I Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q89AM6 1.47e-76 240 37 5 328 3 lepB Signal peptidase I Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P26844 2.35e-57 190 36 12 344 3 lepB Signal peptidase I Pseudomonas fluorescens
Q9I5G7 1.41e-55 185 36 10 344 3 lepB Signal peptidase I Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O67088 5.64e-38 139 34 6 252 3 lepB Signal peptidase I Aquifex aeolicus (strain VF5)
Q8L2J7 1.22e-26 108 31 10 277 1 lepB Signal peptidase I Rickettsia typhi (strain ATCC VR-144 / Wilmington)
A8EXI2 1.56e-26 108 31 7 249 3 lepB Signal peptidase I Rickettsia canadensis (strain McKiel)
A8GM78 2.04e-26 108 33 10 251 3 lepB Signal peptidase I Rickettsia akari (strain Hartford)
Q4UKA7 8.55e-26 107 31 8 263 3 lepB Signal peptidase I Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
A8F0M1 1.03e-25 106 31 8 263 3 lepB Signal peptidase I Rickettsia massiliae (strain Mtu5)
A8GQT7 2.03e-25 105 31 8 263 1 lepB Signal peptidase I Rickettsia rickettsii (strain Sheila Smith)
Q9ZLQ5 9.88e-21 93 28 5 252 3 lepB Signal peptidase I Helicobacter pylori (strain J99 / ATCC 700824)
O25300 3.16e-20 92 28 5 252 3 lepB Signal peptidase I Helicobacter pylori (strain ATCC 700392 / 26695)
Q92JB1 1.4e-18 87 29 9 263 3 lepB Signal peptidase I Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZE32 1.86e-16 81 29 9 248 3 lepB Signal peptidase I Rickettsia prowazekii (strain Madrid E)
Q5HHB9 4.7e-15 75 28 9 245 1 spsB Signal peptidase IB Staphylococcus aureus (strain COL)
Q6GIC3 5.51e-15 75 28 9 245 3 spsB Signal peptidase IB Staphylococcus aureus (strain MRSA252)
P0A069 5.56e-15 75 28 9 245 3 spsB Signal peptidase IB Staphylococcus aureus (strain MW2)
P0A070 5.56e-15 75 28 9 245 3 spsB Signal peptidase IB Staphylococcus aureus
Q6GAW1 5.56e-15 75 28 9 245 3 spsB Signal peptidase IB Staphylococcus aureus (strain MSSA476)
P0A068 5.56e-15 75 28 9 245 1 spsB Signal peptidase IB Staphylococcus aureus (strain N315)
P0A067 5.56e-15 75 28 9 245 3 spsB Signal peptidase IB Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q1RHA1 3.85e-11 66 37 2 99 3 lepB Signal peptidase I Rickettsia bellii (strain RML369-C)
Q1RHA1 2.57e-08 57 40 2 74 3 lepB Signal peptidase I Rickettsia bellii (strain RML369-C)
A8GYE1 3.96e-11 66 37 2 99 3 lepB Signal peptidase I Rickettsia bellii (strain OSU 85-389)
A8GYE1 2.32e-08 58 40 2 74 3 lepB Signal peptidase I Rickettsia bellii (strain OSU 85-389)
P73157 1.14e-10 63 35 3 104 3 lepB2 Probable signal peptidase I-2 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P73157 1.57e-06 52 53 1 43 3 lepB2 Probable signal peptidase I-2 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q57350 1.48e-09 60 35 2 98 3 sipP Signal peptidase I P Bacillus subtilis subsp. natto
P72660 3.69e-09 59 50 2 58 3 lepB1 Probable signal peptidase I-1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P72660 2.54e-06 50 39 2 86 3 lepB1 Probable signal peptidase I-1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P42668 1.21e-08 57 33 2 102 3 lepB Signal peptidase I Bacillus licheniformis
P41027 1.22e-08 57 36 2 91 3 lepB Signal peptidase I Bacillus caldolyticus
Q51876 1.39e-08 57 37 3 93 3 lepB Signal peptidase I Phormidium laminosum
Q51876 8.33e-07 52 51 1 43 3 lepB Signal peptidase I Phormidium laminosum
P71013 2.2e-08 57 28 4 150 1 sipT Signal peptidase I T Bacillus subtilis (strain 168)
P71013 0.000136 45 50 1 40 1 sipT Signal peptidase I T Bacillus subtilis (strain 168)
P37943 2.24e-08 56 34 2 98 1 sipP Signal peptidase I P Bacillus subtilis subsp. natto
P41025 6.62e-07 52 27 3 141 3 sipS2 Signal peptidase I Bacillus amyloliquefaciens
P41025 0.000252 45 50 1 40 3 sipS2 Signal peptidase I Bacillus amyloliquefaciens
P28628 1.71e-06 51 28 4 139 1 sipS Signal peptidase I S Bacillus subtilis (strain 168)
Q8H0W1 2.02e-06 52 43 0 53 2 PLSP1 Chloroplast processing peptidase Arabidopsis thaliana
Q8H0W1 2.45e-06 52 31 4 110 2 PLSP1 Chloroplast processing peptidase Arabidopsis thaliana
O07344 7.06e-06 49 24 9 230 3 lepB Signal peptidase I Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P59662 7.26e-06 49 24 8 227 3 lepB Signal peptidase I Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Q9M9Z2 1.28e-05 50 31 3 102 2 TPP2 Probable thylakoidal processing peptidase 2, chloroplastic Arabidopsis thaliana
Q9M9Z2 0.000128 47 50 0 36 2 TPP2 Probable thylakoidal processing peptidase 2, chloroplastic Arabidopsis thaliana
P42959 4.15e-05 47 32 4 115 1 sipU Signal peptidase I U Bacillus subtilis (strain 168)
O04348 0.000126 47 52 0 36 2 TPP1 Thylakoidal processing peptidase 1, chloroplastic Arabidopsis thaliana
O04348 0.000148 46 30 2 96 2 TPP1 Thylakoidal processing peptidase 1, chloroplastic Arabidopsis thaliana
P28627 0.000308 44 30 3 106 1 IMP1 Mitochondrial inner membrane protease subunit 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6NLT8 0.000328 44 25 3 109 2 IMP1A Mitochondrial ATP-independent inner membrane protease subunit 1a Arabidopsis thaliana
O07560 0.000699 43 31 4 101 2 sipV Signal peptidase I V Bacillus subtilis (strain 168)
P9WKA1 0.000761 44 33 3 86 1 lepB Signal peptidase I Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WKA0 0.000761 44 33 3 86 3 lepB Signal peptidase I Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O74800 0.001 42 29 5 111 3 imp1 Mitochondrial inner membrane protease subunit 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01975
Feature type CDS
Gene lepB
Product signal peptidase I
Location 430591 - 431580 (strand: 1)
Length 990 (nucleotides) / 329 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_560
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10502 Signal peptidase, peptidase S26

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0681 Intracellular trafficking, secretion, and vesicular transport (U) U Signal peptidase I

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03100 signal peptidase I [EC:3.4.21.89] Protein export -

Protein Sequence

MANTFALILTLATLVTGIVWAVNKFKIQPARKKKLARMAELTEGTMDQSHLAATVAKPTWVESTASLFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFMLVEKYAYGLKDPITQTTLIKTGEPKRGDIAVFKYPEDPTLDYVKRVIGLPGDKLIYDPYTKELQIYPACNKDQDNCETLPVTYGQEYESEWANHWEKSPMGGAFMNGSRQFPIEDDMEIGYRRQAERIENLGPVAHHILTVPEITPQSIGEQRLFRQPGLPAYTWVVPQGHYFMMGDNRDNSSDSRVWGFVPEQNLVGRASFIWLSLEKQEGEWPTGLRFSRFGRIE

Flanking regions ( +/- flanking 50bp)

TTCTTCATGTTGGTAAAGATAATTAATTCATCAGGTTGTAAGGAAATCTAATGGCGAACACTTTTGCGCTGATCCTGACCCTGGCAACATTGGTTACCGGGATTGTCTGGGCGGTGAATAAATTTAAAATTCAGCCTGCCCGCAAGAAAAAACTGGCGCGCATGGCGGAACTGACTGAAGGAACAATGGATCAGTCGCATCTGGCCGCCACAGTGGCGAAGCCGACGTGGGTGGAAAGCACCGCATCCCTGTTCCCGGTTCTGGCAATTGTTCTGATTGTCCGCTCATTTATTTATGAGCCGTTTCAGATCCCGTCCGGCTCAATGATGCCGACGTTGTTGATCGGCGATTTCATGCTGGTGGAAAAATATGCGTACGGGTTAAAAGACCCGATCACGCAAACCACGCTGATTAAAACCGGTGAACCAAAGCGCGGAGATATAGCCGTGTTTAAATATCCGGAAGATCCGACGCTGGATTATGTCAAACGCGTGATTGGTCTGCCGGGCGATAAACTGATCTACGATCCGTACACCAAAGAGTTACAAATTTATCCTGCATGCAATAAAGATCAGGATAACTGTGAAACTCTGCCGGTGACTTATGGTCAGGAATATGAAAGTGAATGGGCAAACCACTGGGAAAAATCCCCGATGGGCGGCGCATTTATGAATGGCTCACGCCAGTTCCCGATTGAAGATGATATGGAAATAGGCTATCGCCGCCAGGCTGAACGCATTGAAAACCTGGGACCGGTGGCTCACCACATTCTGACTGTACCTGAAATTACACCACAGAGTATCGGTGAACAGCGTCTGTTCCGCCAGCCGGGATTACCGGCGTATACCTGGGTTGTACCGCAGGGACATTACTTTATGATGGGCGATAACCGTGATAACAGCTCTGACAGCCGCGTCTGGGGATTTGTTCCTGAACAGAACCTGGTTGGCCGTGCGAGTTTCATCTGGTTAAGCCTTGAGAAGCAGGAAGGCGAATGGCCTACAGGCCTGCGCTTCAGCCGTTTCGGACGCATAGAGTAGAAAAACGAGAATTTGCTGAGCATTACTGCGTATCACAGTGTAGAATATGC