COG0681


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0681, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Signal peptidase I
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG0681 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_560 FBDBKF_01420 276949 277941 -1 lepB signal peptidase I Morganella morganii S1
1 group_560 EHELCC_00125 30927 31919 1 lepB signal peptidase I Morganella morganii S2
2 group_560 NLDBIP_03335 648217 649209 -1 lepB signal peptidase I Morganella morganii S4
3 group_560 LHKJJB_04850 255458 256450 -1 lepB signal peptidase I Morganella morganii S3
4 group_560 HKOGLL_02195 31132 32124 1 lepB signal peptidase I Morganella morganii S5
5 group_560 F4V73_RS01975 430591 431580 1 lepB signal peptidase I Morganella psychrotolerans
6 group_560 PMI_RS09325 2035354 2036325 -1 lepB signal peptidase I Proteus mirabilis HI4320