Orthogroup:group_560


Homologs in group_560

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01420 FBDBKF_01420 Morganella morganii S1 lepB signal peptidase I
EHELCC_00125 EHELCC_00125 Morganella morganii S2 lepB signal peptidase I
NLDBIP_03335 NLDBIP_03335 Morganella morganii S4 lepB signal peptidase I
LHKJJB_04850 LHKJJB_04850 Morganella morganii S3 lepB signal peptidase I
HKOGLL_02195 HKOGLL_02195 Morganella morganii S5 lepB signal peptidase I
F4V73_RS01975 F4V73_RS01975 Morganella psychrotolerans lepB signal peptidase I
PMI_RS09325 PMI_RS09325 Proteus mirabilis HI4320 lepB signal peptidase I

Distribution of group_560 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_560 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_560

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_560.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lepB 7

Product

# Product Occurence
1 signal peptidase I 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0681 7 U Intracellular trafficking, secretion, and vesicular transport (U) Signal peptidase I

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03100 7 signal peptidase I [EC:3.4.21.89] Protein export -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF10502 7 Signal peptidase, peptidase S26

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
Chloroplast processing peptidase 1
Mitochondrial ATP-independent inner membrane protease subunit 1a 1
Mitochondrial inner membrane protease subunit 1 4
Mitochondrial inner membrane protease subunit 2 1
Probable signal peptidase I 1
Probable signal peptidase I-1 1
Probable signal peptidase I-2 1
Probable thylakoidal processing peptidase 2, chloroplastic 1
Signal peptidase I 31
Signal peptidase I P 2
Signal peptidase I S 1
Signal peptidase I T 1
Signal peptidase I U 1
Signal peptidase I V 1
Signal peptidase IB 7
Thylakoidal processing peptidase 1, chloroplastic 1

Protein length

Min length 323
Max length 330
Mean length (sd) 328.9 (2.6)
Median length 330.0

Protein length distribution