Homologs in group_236

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01580 FBDBKF_01580 67.0 Morganella morganii S1 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
EHELCC_02050 EHELCC_02050 67.0 Morganella morganii S2 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
NLDBIP_01410 NLDBIP_01410 67.0 Morganella morganii S4 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
LHKJJB_00625 LHKJJB_00625 67.0 Morganella morganii S3 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
HKOGLL_00665 HKOGLL_00665 67.0 Morganella morganii S5 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
F4V73_RS18550 F4V73_RS18550 46.7 Morganella psychrotolerans - autotransporter domain-containing protein
PMI_RS19665 PMI_RS19665 25.9 Proteus mirabilis HI4320 - autotransporter domain-containing protein

Distribution of the homologs in the orthogroup group_236

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_236

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q70XJ9 2.64e-09 64 40 2 80 1 levS Levansucrase Fructilactobacillus sanfranciscensis
Q70XJ9 6.65e-08 60 46 0 49 1 levS Levansucrase Fructilactobacillus sanfranciscensis
Q70XJ9 1.8e-05 52 36 3 86 1 levS Levansucrase Fructilactobacillus sanfranciscensis
Q58A44 3.06e-08 55 44 0 52 1 PCOTH Prostate collagen triple helix protein Homo sapiens
Q58A44 2.52e-07 52 47 1 53 1 PCOTH Prostate collagen triple helix protein Homo sapiens
Q8CQD9 1.95e-06 55 40 2 90 3 SE_0175 Accumulation-associated protein Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CQD9 4.13e-05 50 35 4 117 3 SE_0175 Accumulation-associated protein Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CQD9 8.02e-05 50 50 0 53 3 SE_0175 Accumulation-associated protein Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CQD9 0.000343 48 49 0 53 3 SE_0175 Accumulation-associated protein Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
P16053 2.12e-05 51 44 1 56 2 NEFM Neurofilament medium polypeptide Gallus gallus
P16053 0.000258 48 42 2 63 2 NEFM Neurofilament medium polypeptide Gallus gallus
P32521 0.000644 47 40 0 42 1 PAN1 Actin cytoskeleton-regulatory complex protein PAN1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01645
Feature type CDS
Gene -
Product autotransporter domain-containing protein
Location 361043 - 363205 (strand: 1)
Length 2163 (nucleotides) / 720 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_236
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03797 Autotransporter beta-domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5563 Function unknown (S) S Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats

Protein Sequence

MSTNKQKVFKKSLLALIFFSGTSFSFAAMDYELSALETIGQATAISADGSVVGGTYEIASDSYRPFLIKNGQSVDLSKIQAEGKNTYITGISADGNVITGSIRDMNSSGVSQAYIYNTNTGYLYLSDYPSFSETSSSAISGDGKTMVGIADNRAFRFSEEKGFLLLDSGSTEFSSANGVNSDGSVIVGRATTQQNNLQAFKYTDFTGVVSLGSLINDNDGESSANAISSNGLVTVGWSGANENGDMHAFRHTDIEGMRDLGTLRKDNSGFSMASSVSRDGQFIVGSSSNEDDYSRAFVYVSDEKKMYELKPLENNLAGESSAETISDDGKVVAGYVQGDNNETTAVLWKLNYTPEPVIPLTPLEPSKPVIPLTPLEPSKPVIPLTPLDPSKPVIPPTPVEPLKPIGPEISNPVDVNKTRQSLRKMANNSDQILDLYQTALYNLADSRCQMGSDSYCVGLFTQYDSVQKNNRVATGLFGSFRLRAENWTAGASLNFTNNTNLAEGYDTRGSNHPAVGAWLRYQENMDNTGFSSELSAAFLQQGLEITRKAQKNSEEGKGNSDIKGYYVSLQTGYGISLSEQTKITPLAALKYHDVSRAGYTESDNINFPAAYGRTGNKNLDLQLGVNINHRVNESIELDGGIGADIRINHKRDAFTGLIRYVNDSDYIYDRGESQSVKPYVHAGLNYAITPDSTLRANVGYHTTDYRNDGVQVGLSYSYHW

Flanking regions ( +/- flanking 50bp)

AATCAATGCGGATAATTTTATTAAAATCGCTAAACACTATTTGAGTTTTTATGTCCACGAATAAACAGAAAGTATTTAAAAAATCGTTATTAGCATTAATATTTTTTTCAGGAACCTCATTCTCTTTTGCAGCAATGGATTATGAACTGTCTGCTCTTGAAACGATCGGGCAGGCAACCGCAATTTCAGCTGACGGTAGTGTTGTCGGCGGTACGTATGAAATCGCGTCTGACAGTTACCGCCCTTTCCTGATAAAAAATGGCCAATCTGTTGATTTATCAAAAATACAGGCAGAAGGTAAAAATACGTATATTACAGGGATCTCTGCTGACGGAAATGTCATTACTGGCTCTATCCGTGATATGAATAGTAGCGGAGTATCACAGGCTTATATTTATAATACAAACACCGGATATTTATATCTGTCAGATTACCCTTCATTCAGTGAAACATCGTCGAGTGCGATTTCAGGTGATGGTAAAACGATGGTTGGTATTGCTGACAACCGTGCATTTCGTTTTTCCGAAGAGAAAGGTTTTTTACTGTTAGATTCAGGTAGCACTGAATTTTCCAGTGCTAACGGTGTTAATTCAGATGGTAGTGTTATTGTTGGCAGAGCAACAACTCAACAAAATAATTTGCAGGCATTTAAATATACTGATTTTACCGGTGTCGTTAGTTTAGGTTCTTTAATAAACGATAATGACGGTGAGTCCAGTGCAAATGCCATTTCTTCAAATGGCCTTGTAACGGTCGGTTGGTCTGGTGCAAATGAAAATGGTGATATGCATGCTTTCCGTCATACTGATATTGAAGGAATGCGAGATCTGGGGACATTAAGAAAAGATAACAGCGGCTTTTCAATGGCATCTTCTGTCTCCCGCGATGGTCAGTTTATTGTTGGGTCGTCATCAAATGAAGATGATTATTCACGCGCATTTGTGTATGTATCAGATGAAAAGAAGATGTATGAATTAAAACCGTTAGAAAATAATCTGGCGGGTGAGTCCAGCGCAGAAACTATTTCTGATGACGGTAAAGTAGTAGCGGGTTATGTCCAGGGTGATAATAATGAAACAACCGCTGTTTTGTGGAAGCTGAATTATACTCCTGAGCCGGTAATACCACTGACGCCGCTTGAGCCATCGAAGCCGGTAATACCACTGACGCCGCTTGAACCATCGAAGCCGGTAATACCGCTGACGCCACTTGATCCATCGAAACCGGTAATACCACCGACGCCTGTAGAGCCACTGAAACCGATCGGACCGGAGATCTCAAATCCTGTTGACGTGAATAAAACACGTCAGTCTCTCCGTAAGATGGCAAATAACAGTGATCAGATTCTGGATCTTTATCAGACGGCACTATATAACCTGGCCGACAGCCGCTGTCAGATGGGCAGTGACAGTTATTGTGTTGGTCTGTTTACGCAATACGATAGTGTGCAGAAAAATAATCGTGTTGCGACCGGTTTATTTGGTTCATTCCGTTTACGTGCAGAAAACTGGACAGCAGGTGCCTCTTTAAATTTTACCAATAATACTAATTTGGCAGAAGGCTATGATACCCGGGGAAGTAATCATCCTGCTGTAGGTGCCTGGTTGCGTTATCAGGAGAATATGGATAATACCGGATTCAGTTCTGAGCTTTCTGCTGCATTCTTACAACAGGGGCTGGAGATTACCCGTAAAGCTCAAAAAAATTCCGAGGAAGGTAAAGGTAACTCAGATATTAAAGGCTACTATGTCAGCTTGCAGACGGGTTATGGTATATCGCTCAGTGAGCAGACTAAAATAACACCGCTGGCGGCACTGAAATATCATGATGTCAGCCGTGCGGGTTATACTGAATCGGATAATATCAATTTCCCCGCGGCCTATGGTCGGACAGGAAATAAAAATCTTGATTTACAGCTTGGCGTTAATATAAATCATCGCGTTAATGAAAGTATCGAACTCGATGGTGGTATTGGTGCTGATATCCGGATTAATCATAAACGGGATGCTTTCACCGGGCTTATCCGCTATGTGAACGATTCGGATTATATTTATGATCGCGGGGAAAGTCAGAGTGTAAAACCCTATGTTCATGCCGGTCTGAATTATGCTATTACACCGGATTCCACACTGCGCGCAAATGTGGGTTACCACACTACGGATTATCGTAATGACGGTGTGCAGGTTGGTCTGAGTTACTCCTATCACTGGTAATAATCATTAGTTATTCAGGATACTGAATCTCCTGCGGAGAAATATCCGGC