Homologs in group_3

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26 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00145 FBDBKF_00145 95.6 Morganella morganii S1 - Lysozyme
FBDBKF_12830 FBDBKF_12830 97.5 Morganella morganii S1 - Lysozyme
FBDBKF_13145 FBDBKF_13145 100.0 Morganella morganii S1 - Lysozyme
FBDBKF_18670 FBDBKF_18670 67.7 Morganella morganii S1 - Lysozyme
FBDBKF_19455 FBDBKF_19455 96.8 Morganella morganii S1 - Lysozyme
FBDBKF_19905 FBDBKF_19905 79.1 Morganella morganii S1 rrrD Phage-related lysozyme (muramidase), GH24 family
EHELCC_01400 EHELCC_01400 95.6 Morganella morganii S2 - Lysozyme
EHELCC_07710 EHELCC_07710 79.1 Morganella morganii S2 rrrD Phage-related lysozyme (muramidase), GH24 family
EHELCC_15245 EHELCC_15245 67.7 Morganella morganii S2 - Lysozyme
NLDBIP_02060 NLDBIP_02060 95.6 Morganella morganii S4 - Lysozyme
NLDBIP_08035 NLDBIP_08035 79.1 Morganella morganii S4 rrrD Phage-related lysozyme (muramidase), GH24 family
NLDBIP_09275 NLDBIP_09275 100.0 Morganella morganii S4 - Lysozyme
NLDBIP_15775 NLDBIP_15775 67.7 Morganella morganii S4 - Lysozyme
NLDBIP_19050 NLDBIP_19050 98.1 Morganella morganii S4 - Lysozyme
LHKJJB_03575 LHKJJB_03575 95.6 Morganella morganii S3 - Lysozyme
LHKJJB_04990 LHKJJB_04990 100.0 Morganella morganii S3 - Lysozyme
LHKJJB_06230 LHKJJB_06230 79.1 Morganella morganii S3 rrrD Phage-related lysozyme (muramidase), GH24 family
LHKJJB_16065 LHKJJB_16065 67.7 Morganella morganii S3 - Lysozyme
LHKJJB_18940 LHKJJB_18940 98.1 Morganella morganii S3 - Lysozyme
HKOGLL_00015 HKOGLL_00015 95.6 Morganella morganii S5 - Lysozyme
HKOGLL_05925 HKOGLL_05925 100.0 Morganella morganii S5 - Lysozyme
HKOGLL_15185 HKOGLL_15185 67.7 Morganella morganii S5 - Lysozyme
HKOGLL_19085 HKOGLL_19085 79.1 Morganella morganii S5 rrrD Phage-related lysozyme (muramidase), GH24 family
F4V73_RS02060 F4V73_RS02060 80.7 Morganella psychrotolerans - lysozyme
PMI_RS02440 PMI_RS02440 62.8 Proteus mirabilis HI4320 - lysozyme
PMI_RS04510 PMI_RS04510 62.8 Proteus mirabilis HI4320 - lysozyme

Distribution of the homologs in the orthogroup group_3

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O80292 1.66e-66 202 61 1 160 3 19 SAR-endolysin Bacteriophage PS119
O80288 3.18e-64 197 59 1 160 3 19 SAR-endolysin Bacteriophage PS34
P78285 7.84e-57 178 62 0 126 1 rrrD Lysozyme RrrD Escherichia coli (strain K12)
P10439 4.13e-56 176 61 0 126 3 15 SAR-endolysin Enterobacteria phage PA-2
P27359 6.49e-55 173 60 0 126 1 R SAR-endolysin Enterobacteria phage P21
Q9T1X2 2.04e-45 149 49 2 156 1 lys SAR-endolysin Escherichia phage Mu
Q6XQ98 1.24e-31 114 40 1 156 3 12 SAR-endolysin Escherichia phage T1
P07540 5.25e-27 104 39 1 134 3 15 Endolysin Bacillus phage PZA
Q37896 7.11e-27 104 37 1 132 3 15 Endolysin Bacillus phage B103
P11187 1e-26 103 39 1 134 1 15 Endolysin Bacillus phage phi29
Q9T1T5 1.56e-25 97 41 3 136 3 13 Endolysin Acyrthosiphon pisum secondary endosymbiont phage 1
P68921 1.88e-17 78 34 5 166 3 R SAR-endolysin Enterobacteria phage VT2-Sa
P68920 1.88e-17 78 34 5 166 3 R SAR-endolysin Escherichia phage 933W
O64362 2.42e-16 75 33 5 171 3 54 SAR-endolysin Escherichia phage N15
Q9ZXB7 3.03e-16 74 33 5 166 3 R SAR-endolysin Enterobacteria phage H19B
P09963 6.9e-16 73 34 2 129 1 19 Endolysin Salmonella phage P22
P76159 8.92e-15 70 32 5 166 3 rrrQ Probable prophage lysozyme Escherichia coli (strain K12)
Q7Y2C0 9.34e-15 70 34 4 130 1 45 SAR-endolysin Pseudomonas phage phiKMV
P51728 5.71e-05 44 25 4 148 3 lys SAR-endolysin Haemophilus phage HP1 (strain HP1c1)
Q37875 0.000173 43 26 4 146 1 17 SAR-endolysin Escherichia phage P1
P62693 0.001 41 28 6 140 3 L3 Endolysin Lactococcus phage phivML3
P62692 0.001 41 28 6 140 3 L3 Endolysin Lactococcus phage c2

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_19490
Feature type CDS
Gene -
Product Lysozyme
Location 7947 - 8423 (strand: -1)
Length 477 (nucleotides) / 158 (amino acids)
In genomic island -

Contig

Accession ZDB_246
Length 11590 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3
Orthogroup size 27
N. genomes 7

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Genomic region

Domains

PF00959 Phage lysozyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3772 Cell wall/membrane/envelope biogenesis (M) M Phage-related lysozyme (muramidase), GH24 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01185 lysozyme [EC:3.2.1.17] - -

Protein Sequence

MNNRLFKKVMAACAAGAIAGALVLIPAYEGVEYKPYRDVAGVLTVCYGHTGSDIQPGKLYTDAECKALLHDDLTKVRRAVDPMIKVPIDDNTRAAIYSFAYNTGTGTFSRSTMLRKLNAGDIAGACDEMKRWTFAGGKQWQGLINRRETEKAVCHGTL

Flanking regions ( +/- flanking 50bp)

GAACTGGTATTACAAACGGAAAGAATTCCAGCTGAAAGCCGGAGAACATCATGAATAACCGATTATTTAAAAAAGTCATGGCCGCTTGTGCCGCCGGGGCGATTGCCGGAGCGCTGGTGCTGATCCCCGCGTATGAGGGTGTTGAGTACAAACCTTACCGTGATGTGGCCGGGGTGCTCACCGTATGTTATGGCCATACCGGCAGTGATATTCAGCCCGGCAAGTTGTACACGGACGCTGAATGTAAGGCGCTGCTGCATGACGACCTGACGAAAGTCCGGCGCGCGGTTGACCCGATGATCAAAGTGCCGATTGATGACAATACCCGGGCGGCCATCTATTCATTTGCATATAACACCGGAACCGGTACGTTCTCGCGTTCGACAATGCTGCGGAAACTCAATGCCGGTGATATCGCGGGTGCCTGTGACGAAATGAAACGCTGGACATTTGCCGGTGGTAAGCAGTGGCAGGGTCTGATTAACCGGCGCGAAACGGAGAAAGCGGTATGCCACGGAACCCTTTAACACTGATCATCATTGCTATCATCCTGCTGACTACTGCTCTGTTGGCGGGT