Homologs in group_3378

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12370 FBDBKF_12370 97.0 Morganella morganii S1 rusA Crossover junction endodeoxyribonuclease RusA
NLDBIP_19095 NLDBIP_19095 100.0 Morganella morganii S4 rusA Crossover junction endodeoxyribonuclease RusA
LHKJJB_18985 LHKJJB_18985 100.0 Morganella morganii S3 rusA Crossover junction endodeoxyribonuclease RusA
F4V73_RS06185 F4V73_RS06185 41.5 Morganella psychrotolerans - RusA family crossover junction endodeoxyribonuclease

Distribution of the homologs in the orthogroup group_3378

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3378

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9MCN8 5.68e-16 72 36 4 122 3 rusA Crossover junction endodeoxyribonuclease rusA Enterobacteria phage HK97
Q3YZH8 3.52e-13 64 36 2 119 3 rusA Crossover junction endodeoxyribonuclease RusA Shigella sonnei (strain Ss046)
Q8X707 5.01e-13 64 37 3 125 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli O157:H7
Q1RCY4 5.58e-13 64 36 3 119 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli (strain UTI89 / UPEC)
P0AG74 5.58e-13 64 36 3 119 1 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli (strain K12)
P0AG75 5.58e-13 64 36 3 119 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TIR3 5.58e-13 64 36 3 119 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AA51 5.58e-13 64 36 3 119 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli O1:K1 / APEC
Q37873 3.23e-12 62 37 3 124 3 rusA Crossover junction endodeoxyribonuclease rusA Enterobacteria phage 82
A7ZJG7 8.63e-12 61 36 3 119 3 rusA Crossover junction endodeoxyribonuclease RusA Escherichia coli O139:H28 (strain E24377A / ETEC)
O67766 0.000454 40 25 5 120 3 rusA Crossover junction endodeoxyribonuclease RusA Aquifex aeolicus (strain VF5)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_19125
Feature type CDS
Gene rusA
Product Crossover junction endodeoxyribonuclease RusA
Location 3114 - 3521 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)

Contig

Accession ZDB_242
Length 16493 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3378
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF05866 Endodeoxyribonuclease RusA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4570 Replication, recombination and repair (L) L Holliday junction resolvase RusA (prophage-encoded endonuclease)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01160 crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] - -

Protein Sequence

MKQPLTLTLPFPPSMNTYWRSPSRGALKGRVLISENGRRFRLNVIADILDHFNGRTPKPVTGDISLKLVLFPPSNHRRDLDNFIKAIQDALTHAGIWNDDSQVKHLDIEWGEKVAGGKSVVTISPYVKRAVYGCA

Flanking regions ( +/- flanking 50bp)

GATCTGCTTTTTACTGAAAATAAAATGGCTCAACTTAAAGGGGAGGTTGGATGAAACAGCCTTTAACCCTCACACTCCCGTTCCCGCCAAGCATGAACACTTACTGGCGCTCCCCATCGCGGGGAGCCTTAAAAGGCCGGGTGCTGATCAGTGAAAACGGCCGCCGGTTCCGTCTGAATGTTATTGCTGACATCCTGGATCATTTTAACGGCCGGACACCGAAACCGGTCACCGGTGATATCAGCCTGAAGCTGGTGCTGTTCCCGCCATCGAATCACCGCCGGGATCTGGATAACTTCATCAAGGCGATACAGGACGCACTGACACATGCCGGTATCTGGAATGACGACAGCCAGGTAAAGCATCTTGATATTGAATGGGGTGAAAAAGTCGCTGGTGGTAAATCCGTGGTGACGATCAGCCCCTATGTAAAACGCGCAGTATACGGCTGCGCTTAATGAGTGGAGAGATAACGATGAGCAATCTGATTATTGTCGATGGTATTAAT