Homologs in group_3040

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18140 FBDBKF_18140 100.0 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
NLDBIP_17610 NLDBIP_17610 100.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_17530 LHKJJB_17530 100.0 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_17345 HKOGLL_17345 100.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10345 F4V73_RS10345 75.8 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_3040

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3040

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76500 3.63e-06 47 21 3 161 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_16840
Feature type CDS
Gene fimA
Product Pilin (type 1 fimbrial protein)
Location 28974 - 29465 (strand: -1)
Length 492 (nucleotides) / 163 (amino acids)

Contig

Accession ZDB_230
Length 55766 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3040
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MRHLITALMLSCFALPVYAGTGVAHSSANIRITGRLQPPPPCKVNNNEEILVDFQRIQIKMLEKSDIRKDVDIPFVCEQDSENFKYFLTVDGPRAQFNNKLVKTNQNNVGFNIELAGVKLDLGKAQLVSSRHLTLTIVLTKNPNGDVTPGSFSGTGTVTMEYF

Flanking regions ( +/- flanking 50bp)

AATTCAATGCCACGGCCACTATCCATATCGATTATGAATAAGGAATTGTGATGCGACATTTAATCACAGCTCTGATGCTGTCCTGTTTTGCTCTGCCGGTGTATGCCGGTACAGGGGTAGCACACAGTTCCGCCAATATCCGGATCACCGGAAGGCTTCAGCCGCCGCCGCCCTGTAAAGTGAATAACAACGAGGAAATCCTGGTCGATTTTCAGCGCATCCAGATAAAAATGCTGGAAAAGTCAGATATCCGCAAAGATGTGGATATCCCCTTTGTCTGTGAGCAGGACTCAGAGAATTTCAAATATTTCCTCACCGTTGACGGGCCGCGGGCACAGTTCAATAACAAACTGGTGAAAACCAACCAGAATAACGTGGGCTTTAATATTGAACTCGCCGGGGTGAAACTGGATTTGGGCAAAGCGCAGCTGGTGAGCAGCCGCCATCTGACATTAACCATTGTGCTGACCAAAAACCCTAACGGGGACGTCACGCCCGGCTCCTTCAGCGGCACCGGCACTGTAACGATGGAGTATTTCTGATGAACCACCCTGCTGATTTCAGTCTGTTATTCAGCGCTGCACTGATATTC