Homologs in group_3044

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18140 FBDBKF_18140 100.0 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_16840 EHELCC_16840 100.0 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_17610 NLDBIP_17610 100.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
HKOGLL_17345 HKOGLL_17345 100.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10345 F4V73_RS10345 75.8 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_3044

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3044

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76500 3.63e-06 47 21 3 161 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17530
Feature type CDS
Gene fimA
Product Pilin (type 1 fimbrial protein)
Location 26301 - 26792 (strand: 1)
Length 492 (nucleotides) / 163 (amino acids)
In genomic island -

Contig

Accession ZDB_379
Length 55765 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3044
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MRHLITALMLSCFALPVYAGTGVAHSSANIRITGRLQPPPPCKVNNNEEILVDFQRIQIKMLEKSDIRKDVDIPFVCEQDSENFKYFLTVDGPRAQFNNKLVKTNQNNVGFNIELAGVKLDLGKAQLVSSRHLTLTIVLTKNPNGDVTPGSFSGTGTVTMEYF

Flanking regions ( +/- flanking 50bp)

AATTCAATGCCACGGCCACTATCCATATCGATTATGAATAAGGAATTGTGATGCGACATTTAATCACAGCTCTGATGCTGTCCTGTTTTGCTCTGCCGGTGTATGCCGGTACAGGGGTAGCACACAGTTCCGCCAATATCCGGATCACCGGAAGGCTTCAGCCGCCGCCGCCCTGTAAAGTGAATAACAACGAGGAAATCCTGGTCGATTTTCAGCGCATCCAGATAAAAATGCTGGAAAAGTCAGATATCCGCAAAGATGTGGATATCCCCTTTGTCTGTGAGCAGGACTCAGAGAATTTCAAATATTTCCTCACCGTTGACGGGCCGCGGGCACAGTTCAATAACAAACTGGTGAAAACCAACCAGAATAACGTGGGCTTTAATATTGAACTCGCCGGGGTGAAACTGGATTTGGGCAAAGCGCAGCTGGTGAGCAGCCGCCATCTGACATTAACCATTGTGCTGACCAAAAACCCTAACGGGGACGTCACGCCCGGCTCCTTCAGCGGCACCGGCACTGTAACGATGGAGTATTTCTGATGAACCACCCTGCTGATTTCAGTCTGTTATTCAGCGCTGCACTGATATTC