Homologs in group_2951

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5 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15650 FBDBKF_15650 100.0 Morganella morganii S1 - Type I restriction modification DNA specificity domain-containing protein
FBDBKF_16610 FBDBKF_16610 26.3 Morganella morganii S1 - Restriction endonuclease subunit S
NLDBIP_16360 NLDBIP_16360 100.0 Morganella morganii S4 - Type I restriction modification DNA specificity domain-containing protein
LHKJJB_16440 LHKJJB_16440 100.0 Morganella morganii S3 - Type I restriction modification DNA specificity domain-containing protein
HKOGLL_16210 HKOGLL_16210 100.0 Morganella morganii S5 - Type I restriction modification DNA specificity domain-containing protein

Distribution of the homologs in the orthogroup group_2951

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2951

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06187 3.76e-40 152 30 14 440 3 hsdS Type I restriction enzyme StySJI specificity subunit Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P06990 1.93e-20 96 27 10 320 1 hsdS Type I restriction enzyme EcoBI specificity subunit Escherichia coli
P06990 1.43e-06 53 24 2 165 1 hsdS Type I restriction enzyme EcoBI specificity subunit Escherichia coli
P05719 1.25e-16 85 24 19 446 1 hsdS Type I restriction enzyme EcoKI specificity subunit Escherichia coli (strain K12)
P07990 9.9e-16 82 26 19 441 3 hsdS Type I restriction enzyme StySPI specificity subunit Salmonella potsdam
Q58926 6.61e-09 61 24 17 393 3 MJ1531 Putative type I restriction enzyme MjaX specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P06991 3.75e-06 52 22 8 309 3 hsdS Type I restriction enzyme EcoDI specificity subunit Escherichia coli
P71344 2.2e-05 50 25 10 248 3 HI_0216 Putative type I restriction enzyme specificity subunit S.HindORF215P Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P19704 2.9e-05 50 24 8 185 1 hsdS Type I restriction enzyme EcoAI specificity subunit Escherichia coli
Q57594 7.75e-05 48 24 7 189 1 MJ0130 Type I restriction enzyme MjaVII specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_16005
Feature type CDS
Gene -
Product Type I restriction modification DNA specificity domain-containing protein
Location 61885 - 63105 (strand: -1)
Length 1221 (nucleotides) / 406 (amino acids)

Contig

Accession ZDB_227
Length 79950 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2951
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF01420 Type I restriction modification DNA specificity domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0732 Defense mechanisms (V) V Restriction endonuclease S subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] - -

Protein Sequence

MEQVLYKLPDGWEWHSVKKLSHNIQYGHTAKAESNGNAKFLRITDIQDGKIDWQGVPTVSLEEKEISKYALNDDDLIFARSGATAGKSILIKNAPKDAVFASYLIRIVPNKKDIIPEYLSYFFLSPAYWEVVGQNAAGAAQPNINGTKLSEFIVPVAPQGEQKRIVEKLDALLTRIDTAIEHLQESVTLKNSLLQSALDGQFSAITERMTIESLAEVKGGKRLPKGEKLGDKETEHPYIRVADFTDKGTIDLSDIKYISKEIHEQIKRYVISKDDLYISIAGTIGKTGFVPPELDGANLTENAAKLVIKDKQQLDLSYLYLFTLTSDFSAQAGLATKTVAQPKLALTRLSKIEIPMCSLKEQKLLVSTIEALKSKIHDAEAVLLGKIEDLNSLKASILDSAFKGEL

Flanking regions ( +/- flanking 50bp)

GTGTCAGGCCTCTTGGATGAAATCGAAAACCTGTTGGCGGAGAAATAAGCATGGAACAGGTTTTGTATAAACTGCCAGATGGGTGGGAGTGGCATTCAGTCAAAAAGCTTAGCCATAACATCCAGTATGGGCACACGGCTAAAGCAGAAAGTAACGGTAACGCAAAGTTCTTGCGTATTACTGATATTCAAGATGGAAAGATCGACTGGCAGGGAGTTCCAACAGTATCCCTAGAAGAAAAAGAAATCAGCAAGTACGCGTTGAATGATGATGACTTGATCTTTGCCCGTAGTGGTGCAACTGCGGGAAAATCTATTCTAATCAAGAATGCGCCAAAGGATGCCGTATTCGCATCTTACTTGATTAGAATTGTTCCAAACAAAAAGGACATTATTCCAGAATATTTAAGTTATTTCTTCCTATCACCTGCTTACTGGGAGGTTGTTGGTCAGAATGCCGCAGGCGCAGCTCAGCCCAACATCAACGGCACAAAGCTTTCAGAGTTTATTGTACCTGTGGCTCCTCAAGGAGAACAGAAACGCATCGTCGAAAAACTCGATGCATTGCTCACCCGTATCGACACCGCCATCGAGCATTTGCAAGAAAGCGTCACACTGAAAAATAGCCTTCTTCAATCAGCACTCGATGGTCAGTTTTCAGCTATCACTGAGAGAATGACGATTGAATCGCTGGCTGAGGTAAAAGGCGGCAAGCGCTTACCAAAAGGCGAAAAGCTAGGTGATAAAGAGACTGAGCACCCATATATCCGAGTGGCAGATTTTACAGATAAAGGAACAATAGATTTATCTGACATCAAATACATATCGAAGGAAATCCACGAGCAAATCAAACGCTATGTGATTTCCAAGGACGACCTTTATATCAGTATTGCTGGAACTATCGGTAAGACAGGTTTCGTCCCCCCAGAATTGGACGGCGCAAACCTGACAGAAAACGCTGCTAAGTTGGTTATCAAAGATAAGCAACAACTAGATTTAAGCTACCTGTATCTGTTTACATTGACCTCAGACTTCTCTGCTCAAGCAGGGCTAGCGACCAAGACAGTTGCACAGCCTAAGTTGGCGCTAACTCGCTTAAGTAAGATTGAAATCCCAATGTGTTCCTTGAAAGAGCAGAAATTATTGGTGTCGACGATTGAGGCACTGAAAAGCAAAATTCACGATGCGGAAGCAGTTCTTCTAGGGAAAATAGAAGATTTGAATAGCTTAAAAGCATCAATTCTTGATTCCGCCTTTAAAGGCGAGCTCTAAGGAGGGAGTATGAGTTTACAAACCAACCTCAAAGGCCGACTGAGAAACAC