Homologs in group_4004
0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product |
|---|
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P10485 | 8.93e-81 | 256 | 40 | 13 | 430 | 1 | hsdS | Type I restriction enzyme EcoR124I/EcoR124II specificity subunit | Escherichia coli |
| P17222 | 2.11e-41 | 153 | 31 | 10 | 397 | 3 | prrB | Type I restriction enzyme EcoprrI specificity subunit | Escherichia coli |
| P17222 | 2.95e-08 | 58 | 53 | 0 | 54 | 3 | prrB | Type I restriction enzyme EcoprrI specificity subunit | Escherichia coli |
| P71344 | 9.38e-36 | 138 | 29 | 18 | 429 | 3 | HI_0216 | Putative type I restriction enzyme specificity subunit S.HindORF215P | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| P71344 | 6.31e-09 | 60 | 32 | 3 | 125 | 3 | HI_0216 | Putative type I restriction enzyme specificity subunit S.HindORF215P | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| P75604 | 1.35e-17 | 86 | 29 | 11 | 312 | 3 | MPN_089 | Putative type I specificity subunit S.MpnORF89P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75180 | 2.42e-16 | 81 | 28 | 9 | 251 | 1 | MPN_615 | Putative type I specificity subunit S.MpnORF615P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75416 | 7.61e-16 | 80 | 27 | 9 | 253 | 1 | MPN_365 | Putative type I specificity subunit S.MpnORF365P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| Q50287 | 1.33e-15 | 79 | 26 | 10 | 263 | 3 | MPN_201 | Putative type I specificity subunit S.MpnORF201P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75435 | 6.94e-14 | 75 | 26 | 9 | 263 | 1 | MPN_343 | Type I restriction enzyme MpnII specificity subunit | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75492 | 5.34e-11 | 66 | 28 | 11 | 255 | 3 | MPN_285 | Putative type I specificity subunit S.MpnORF285P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75279 | 1.25e-09 | 62 | 23 | 9 | 306 | 1 | MPN_507 | Putative type I specificity subunit S.MpnORF507P | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75487 | 1.56e-07 | 53 | 44 | 0 | 54 | 3 | MPN_290 | Putative type I specificity subunit S.MpnORF289P C-terminus | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| P75488 | 0.000115 | 46 | 41 | 3 | 80 | 3 | MPN_289 | Putative type I specificity subunit S.MpnORF289P N-terminus | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| Source | Morganella morganii S1 |
|---|---|
| Locus tag | FBDBKF_16610 |
| Feature type | CDS |
| Gene | - |
| Product | Restriction endonuclease subunit S |
| Location | 5402 - 6595 (strand: -1) |
| Length | 1194 (nucleotides) / 397 (amino acids) |
| In genomic island | - |
| Accession | contig_25 |
|---|---|
| Length | 47933 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_4004 | |
|---|---|---|
| Orthogroup size | 1 | |
| N. genomes | 1 |
| PF01420 | Type I restriction modification DNA specificity domain |
|---|
| ID | Function(s) descr. | Function(s) cat. | Description |
|---|---|---|---|
| COG0732 | Defense mechanisms (V) | V | Restriction endonuclease S subunit |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K01154 | type I restriction enzyme, S subunit [EC:3.1.21.3] | - | - |
MSELNYLEKLLDGAEVEWKPLGKVLVRTRGTKITAGQMKILHQDNAPLKIFAGGKTVAFVNFGDIPEKDINREPSIIVKSRGIIEFEFCDKPFSHKNEMWSYHSANKYINIRYVYHYLKLHEVYFQGIGSKMQMPQIAIPDTENYLIPIPCPGNPEKSLAIQSEIVRILDAFTALTAELTAELTARKKQYNYYRDQLLSFNDGKVEWKTLGEIAGYSKARISFDKLNENNYVGVDNLLQNRAGKTLSNYLPTSGNLTKFDIGDILIGNIRPYLKKIWQSDCVGGTNGDVLVIHCSDSSVCSRYLYQVLADDAFFEYNMQHAKGAKMPRGNKEAILKYSVPVPSVTEQTRIVSILDKFDALTNSITEGLPREIELRQKQYEYYRDLLFSFPEPESVNN
AAAGAGATTGATACGATTGTCGCAGAAATCGAAGGTAATGAGGCACAGTTATGAGTGAGCTGAATTATCTGGAAAAGCTCCTGGACGGGGCTGAAGTTGAGTGGAAGCCACTTGGTAAAGTGTTAGTTAGAACCAGAGGCACTAAGATAACAGCCGGACAAATGAAAATTTTGCATCAGGATAATGCACCTTTAAAAATATTTGCTGGTGGTAAAACAGTTGCTTTTGTTAATTTTGGTGATATTCCTGAAAAAGATATAAATCGAGAGCCTTCAATTATTGTAAAGTCACGAGGGATTATTGAGTTCGAATTCTGTGACAAACCGTTTTCTCATAAAAATGAAATGTGGTCTTACCACTCTGCAAATAAATACATAAACATCAGATATGTTTATCACTATCTGAAGTTACATGAGGTATATTTTCAGGGGATTGGTAGTAAAATGCAAATGCCACAAATAGCAATACCTGATACTGAAAACTATCTCATCCCCATCCCTTGCCCCGGCAACCCAGAAAAATCCCTTGCGATTCAATCTGAAATCGTCCGGATTCTGGATGCATTTACCGCCCTTACCGCTGAGCTTACCGCTGAGCTTACCGCACGTAAGAAACAATACAACTACTATCGTGACCAGTTGCTGAGTTTTAATGACGGCAAGGTGGAGTGGAAAACACTGGGAGAGATTGCAGGATATTCCAAAGCCCGCATTAGCTTCGATAAACTCAATGAAAACAATTATGTGGGTGTTGATAATCTTCTGCAAAATCGGGCAGGGAAAACATTGTCAAATTATTTACCTACATCAGGTAATCTTACGAAATTTGATATTGGTGACATATTAATTGGTAACATCAGACCATATCTGAAAAAAATTTGGCAATCTGACTGTGTTGGTGGAACAAATGGTGATGTGTTAGTTATCCACTGTAGTGATAGCTCAGTTTGTTCACGATATTTGTACCAGGTGCTGGCTGATGATGCTTTTTTTGAATATAACATGCAGCACGCTAAAGGTGCCAAAATGCCACGGGGTAACAAAGAAGCAATTTTAAAATATTCAGTACCGGTTCCCTCTGTTACGGAGCAGACAAGAATTGTCAGTATTCTCGATAAGTTTGATGCATTAACTAATTCCATCACTGAAGGCTTGCCCCGTGAAATCGAGTTGCGCCAAAAGCAGTACGAATATTACCGTGACTTACTGTTCAGCTTTCCGGAACCGGAATCGGTGAACAACTGACACATGACCGCCTGATAACGTCTGTTATGCCGGTTTTACCGGCATTCAGC
