Homologs in group_2951

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15650 FBDBKF_15650 26.3 Morganella morganii S1 - Type I restriction modification DNA specificity domain-containing protein
EHELCC_16005 EHELCC_16005 26.3 Morganella morganii S2 - Type I restriction modification DNA specificity domain-containing protein
NLDBIP_16360 NLDBIP_16360 26.3 Morganella morganii S4 - Type I restriction modification DNA specificity domain-containing protein
LHKJJB_16440 LHKJJB_16440 26.3 Morganella morganii S3 - Type I restriction modification DNA specificity domain-containing protein
HKOGLL_16210 HKOGLL_16210 26.3 Morganella morganii S5 - Type I restriction modification DNA specificity domain-containing protein

Distribution of the homologs in the orthogroup group_2951

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2951

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P10485 8.93e-81 256 40 13 430 1 hsdS Type I restriction enzyme EcoR124I/EcoR124II specificity subunit Escherichia coli
P17222 2.11e-41 153 31 10 397 3 prrB Type I restriction enzyme EcoprrI specificity subunit Escherichia coli
P17222 2.95e-08 58 53 0 54 3 prrB Type I restriction enzyme EcoprrI specificity subunit Escherichia coli
P71344 9.38e-36 138 29 18 429 3 HI_0216 Putative type I restriction enzyme specificity subunit S.HindORF215P Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P71344 6.31e-09 60 32 3 125 3 HI_0216 Putative type I restriction enzyme specificity subunit S.HindORF215P Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P75604 1.35e-17 86 29 11 312 3 MPN_089 Putative type I specificity subunit S.MpnORF89P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75180 2.42e-16 81 28 9 251 1 MPN_615 Putative type I specificity subunit S.MpnORF615P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75416 7.61e-16 80 27 9 253 1 MPN_365 Putative type I specificity subunit S.MpnORF365P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q50287 1.33e-15 79 26 10 263 3 MPN_201 Putative type I specificity subunit S.MpnORF201P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75435 6.94e-14 75 26 9 263 1 MPN_343 Type I restriction enzyme MpnII specificity subunit Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75492 5.34e-11 66 28 11 255 3 MPN_285 Putative type I specificity subunit S.MpnORF285P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75279 1.25e-09 62 23 9 306 1 MPN_507 Putative type I specificity subunit S.MpnORF507P Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75487 1.56e-07 53 44 0 54 3 MPN_290 Putative type I specificity subunit S.MpnORF289P C-terminus Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P75488 0.000115 46 41 3 80 3 MPN_289 Putative type I specificity subunit S.MpnORF289P N-terminus Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16610
Feature type CDS
Gene -
Product Restriction endonuclease subunit S
Location 5402 - 6595 (strand: -1)
Length 1194 (nucleotides) / 397 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2951
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF01420 Type I restriction modification DNA specificity domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0732 Defense mechanisms (V) V Restriction endonuclease S subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] - -

Protein Sequence

MSELNYLEKLLDGAEVEWKPLGKVLVRTRGTKITAGQMKILHQDNAPLKIFAGGKTVAFVNFGDIPEKDINREPSIIVKSRGIIEFEFCDKPFSHKNEMWSYHSANKYINIRYVYHYLKLHEVYFQGIGSKMQMPQIAIPDTENYLIPIPCPGNPEKSLAIQSEIVRILDAFTALTAELTAELTARKKQYNYYRDQLLSFNDGKVEWKTLGEIAGYSKARISFDKLNENNYVGVDNLLQNRAGKTLSNYLPTSGNLTKFDIGDILIGNIRPYLKKIWQSDCVGGTNGDVLVIHCSDSSVCSRYLYQVLADDAFFEYNMQHAKGAKMPRGNKEAILKYSVPVPSVTEQTRIVSILDKFDALTNSITEGLPREIELRQKQYEYYRDLLFSFPEPESVNN

Flanking regions ( +/- flanking 50bp)

AAAGAGATTGATACGATTGTCGCAGAAATCGAAGGTAATGAGGCACAGTTATGAGTGAGCTGAATTATCTGGAAAAGCTCCTGGACGGGGCTGAAGTTGAGTGGAAGCCACTTGGTAAAGTGTTAGTTAGAACCAGAGGCACTAAGATAACAGCCGGACAAATGAAAATTTTGCATCAGGATAATGCACCTTTAAAAATATTTGCTGGTGGTAAAACAGTTGCTTTTGTTAATTTTGGTGATATTCCTGAAAAAGATATAAATCGAGAGCCTTCAATTATTGTAAAGTCACGAGGGATTATTGAGTTCGAATTCTGTGACAAACCGTTTTCTCATAAAAATGAAATGTGGTCTTACCACTCTGCAAATAAATACATAAACATCAGATATGTTTATCACTATCTGAAGTTACATGAGGTATATTTTCAGGGGATTGGTAGTAAAATGCAAATGCCACAAATAGCAATACCTGATACTGAAAACTATCTCATCCCCATCCCTTGCCCCGGCAACCCAGAAAAATCCCTTGCGATTCAATCTGAAATCGTCCGGATTCTGGATGCATTTACCGCCCTTACCGCTGAGCTTACCGCTGAGCTTACCGCACGTAAGAAACAATACAACTACTATCGTGACCAGTTGCTGAGTTTTAATGACGGCAAGGTGGAGTGGAAAACACTGGGAGAGATTGCAGGATATTCCAAAGCCCGCATTAGCTTCGATAAACTCAATGAAAACAATTATGTGGGTGTTGATAATCTTCTGCAAAATCGGGCAGGGAAAACATTGTCAAATTATTTACCTACATCAGGTAATCTTACGAAATTTGATATTGGTGACATATTAATTGGTAACATCAGACCATATCTGAAAAAAATTTGGCAATCTGACTGTGTTGGTGGAACAAATGGTGATGTGTTAGTTATCCACTGTAGTGATAGCTCAGTTTGTTCACGATATTTGTACCAGGTGCTGGCTGATGATGCTTTTTTTGAATATAACATGCAGCACGCTAAAGGTGCCAAAATGCCACGGGGTAACAAAGAAGCAATTTTAAAATATTCAGTACCGGTTCCCTCTGTTACGGAGCAGACAAGAATTGTCAGTATTCTCGATAAGTTTGATGCATTAACTAATTCCATCACTGAAGGCTTGCCCCGTGAAATCGAGTTGCGCCAAAAGCAGTACGAATATTACCGTGACTTACTGTTCAGCTTTCCGGAACCGGAATCGGTGAACAACTGACACATGACCGCCTGATAACGTCTGTTATGCCGGTTTTACCGGCATTCAGC