COG0732


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0732, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Restriction endonuclease S subunit
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG0732 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3305 FBDBKF_10280 9617 11365 1 Restriction endonuclease subunit S Morganella morganii S1
1 group_2951 FBDBKF_15650 62585 63805 -1 Type I restriction modification DNA specificity domain-containing protein Morganella morganii S1
2 group_2951 FBDBKF_16610 5402 6595 -1 Restriction endonuclease subunit S Morganella morganii S1
3 group_3305 EHELCC_14615 9607 11355 1 Restriction endonuclease subunit S Morganella morganii S2
4 group_2951 EHELCC_16005 61885 63105 -1 Type I restriction modification DNA specificity domain-containing protein Morganella morganii S2
5 group_3305 NLDBIP_14445 9607 11355 1 Restriction endonuclease subunit S Morganella morganii S4
6 group_2951 NLDBIP_16360 17558 18778 1 Type I restriction modification DNA specificity domain-containing protein Morganella morganii S4
7 group_3305 LHKJJB_14900 130371 132119 -1 Restriction endonuclease subunit S Morganella morganii S3
8 group_2951 LHKJJB_16440 61885 63105 -1 Type I restriction modification DNA specificity domain-containing protein Morganella morganii S3
9 group_3305 HKOGLL_13520 130371 132119 -1 Restriction endonuclease subunit S Morganella morganii S5
10 group_2951 HKOGLL_16210 61885 63105 -1 Type I restriction modification DNA specificity domain-containing protein Morganella morganii S5