Homologs in group_1582

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10325 FBDBKF_10325 100.0 Morganella morganii S1 gdhA NADP-specific glutamate dehydrogenase
NLDBIP_14490 NLDBIP_14490 100.0 Morganella morganii S4 gdhA NADP-specific glutamate dehydrogenase
LHKJJB_14855 LHKJJB_14855 100.0 Morganella morganii S3 gdhA NADP-specific glutamate dehydrogenase
HKOGLL_13475 HKOGLL_13475 100.0 Morganella morganii S5 gdhA NADP-specific glutamate dehydrogenase
F4V73_RS14025 F4V73_RS14025 94.2 Morganella psychrotolerans gdhA NADP-specific glutamate dehydrogenase
PMI_RS14875 PMI_RS14875 83.0 Proteus mirabilis HI4320 gdhA NADP-specific glutamate dehydrogenase

Distribution of the homologs in the orthogroup group_1582

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1582

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00370 0.0 772 82 1 447 1 gdhA NADP-specific glutamate dehydrogenase Escherichia coli (strain K12)
Q8Z6F6 0.0 765 81 1 447 3 gdhA NADP-specific glutamate dehydrogenase Salmonella typhi
P15111 0.0 765 81 1 447 3 gdhA NADP-specific glutamate dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P14657 0.0 750 80 2 447 3 gdhA NADP-specific glutamate dehydrogenase Unknown prokaryotic organism
P43793 0.0 687 75 2 448 3 gdhA NADP-specific glutamate dehydrogenase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P95544 0.0 553 61 2 437 1 gdhA NAD(P)-specific glutamate dehydrogenase Xylanibacter ruminicola
P94598 0.0 542 59 2 438 3 gdhA Glutamate dehydrogenase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
P94316 9.44e-178 507 55 3 445 2 gdhB NAD-specific glutamate dehydrogenase Bacteroides fragilis (strain YCH46)
P0C934 7.29e-175 499 56 3 435 1 gdh NAD-specific glutamate dehydrogenase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
B2RKJ1 7.29e-175 499 56 3 435 3 gdh NAD-specific glutamate dehydrogenase Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
P55990 1.21e-174 499 56 4 451 3 gdhA NADP-specific glutamate dehydrogenase Helicobacter pylori (strain ATCC 700392 / 26695)
P28724 5.08e-173 495 55 5 447 2 None NADP-specific glutamate dehydrogenase Giardia intestinalis
Q9ZKD8 5.65e-173 495 56 4 448 3 gdhA NADP-specific glutamate dehydrogenase Helicobacter pylori (strain J99 / ATCC 700824)
Q8RQP4 3.03e-171 491 58 5 446 3 gdh NADP-specific glutamate dehydrogenase Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P31026 2.09e-168 483 57 4 443 1 gdh NADP-specific glutamate dehydrogenase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P28998 5.77e-168 485 55 6 445 2 None NADP-specific glutamate dehydrogenase (Fragment) Chlorella sorokiniana
Q9S1F9 5.7e-165 474 53 2 447 1 gdhA NADP-specific glutamate dehydrogenase Psychrobacter sp. (strain TAD1)
P24295 4.7e-159 460 52 7 453 1 gdh NAD-specific glutamate dehydrogenase Clostridium symbiosum
Q96UJ9 2.27e-152 442 52 5 446 2 None NADP-specific glutamate dehydrogenase Hebeloma cylindrosporum
P54388 5.7e-151 439 52 6 446 2 GDHA NADP-specific glutamate dehydrogenase Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686)
O93934 1.59e-150 438 54 8 445 3 gdhA NADP-specific glutamate dehydrogenase Botryotinia fuckeliana
P00369 2.75e-150 437 55 8 447 1 gdh NADP-specific glutamate dehydrogenase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q9HGU4 4.02e-150 437 55 8 447 2 GDH NADP-specific glutamate dehydrogenase Neurospora intermedia
Q9URS1 4.02e-149 435 54 9 455 3 GDH NADP-specific glutamate dehydrogenase Penicillium chrysogenum
Q9HGU3 1.13e-148 433 54 8 446 2 GDH NADP-specific glutamate dehydrogenase Neurospora sitophila
P54387 4.5e-148 432 50 6 453 3 gdhA NADP-specific glutamate dehydrogenase Agaricus bisporus
P18819 2.17e-146 428 53 10 458 3 gdhA NADP-specific glutamate dehydrogenase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q96VJ7 3.34e-146 427 52 7 446 3 GDH2 NADP-specific glutamate dehydrogenase Gibberella fujikuroi
P39708 4.01e-145 424 52 8 454 3 GDH3 NADP-specific glutamate dehydrogenase 2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P07262 7.24e-144 421 50 7 452 1 GDH1 NADP-specific glutamate dehydrogenase 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8TFF6 6.84e-142 416 50 8 454 3 GDH1 NADP-specific glutamate dehydrogenase 1 Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 10550 / MCYC 623 / NCYC 2669 / NRRL Y-11845)
P29507 1.1e-137 405 50 10 453 3 GDHA NADP-specific glutamate dehydrogenase Schwanniomyces occidentalis
Q9HFR6 1.96e-134 397 51 10 458 3 GDH NADP-specific glutamate dehydrogenase Tuber borchii
P78804 1.6e-126 377 48 8 447 1 gdh1 NADP-specific glutamate dehydrogenase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5MBG2 8.71e-56 193 32 7 421 1 gdhA1 NADP-specific glutamate dehydrogenase A1 Halobacterium salinarum
Q9HRM7 8.71e-56 193 32 7 421 3 gdhA1 NADP-specific glutamate dehydrogenase A1 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
P80053 1.73e-50 179 29 9 407 1 gdhA-2 Glutamate dehydrogenase 2 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
A3MWK6 2.55e-50 179 32 7 399 1 Pcal_1606 NADP(+)-dependent glutamate dehydrogenase Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1)
Q7A1B9 3.83e-49 176 30 6 401 3 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain MW2)
Q6GAW8 3.83e-49 176 30 6 401 3 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain MSSA476)
Q6GID0 3.83e-49 176 30 6 401 3 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain MRSA252)
Q7A6H8 3.83e-49 176 30 6 401 1 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain N315)
Q99VD0 3.83e-49 176 30 6 401 3 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HHC7 3.83e-49 176 30 6 401 3 gluD NAD-specific glutamate dehydrogenase Staphylococcus aureus (strain COL)
O04937 4.1e-49 175 30 5 387 2 GDHA Glutamate dehydrogenase A Nicotiana plumbaginifolia
P96110 1.09e-48 174 32 6 391 1 gdhA Glutamate dehydrogenase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P80319 4.31e-48 173 31 10 418 1 gdhA Glutamate dehydrogenase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
P39633 4.7e-48 173 30 5 390 1 rocG Catabolic NAD-specific glutamate dehydrogenase RocG Bacillus subtilis (strain 168)
O74024 1.54e-47 171 31 8 416 1 gdhA Glutamate dehydrogenase Thermococcus profundus
P52596 2.45e-47 171 30 5 392 2 GDH Glutamate dehydrogenase Vitis vinifera
Q47951 3.07e-47 171 31 10 418 1 gdhA Glutamate dehydrogenase Pyrococcus endeavori
Q47950 4.99e-47 170 30 10 418 3 gdhA Glutamate dehydrogenase Pyrococcus abyssi (strain GE5 / Orsay)
Q43314 6.43e-47 169 30 7 405 1 GDH1 Glutamate dehydrogenase 1 Arabidopsis thaliana
P0CL72 9.59e-47 169 32 10 400 3 gdhA Glutamate dehydrogenase Pyrococcus horikoshii
P0CL73 9.59e-47 169 32 10 400 3 gdhA Glutamate dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q56304 1.2e-46 169 30 9 417 1 gdhA Glutamate dehydrogenase Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Q9S7A0 1.59e-46 169 30 7 405 3 GSH3 Probable glutamate dehydrogenase 3 Arabidopsis thaliana
A3MUY9 3.16e-46 168 31 9 396 1 Pcal_1031 NAD(+)-dependent glutamate dehydrogenase Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1)
Q33E23 5.79e-46 167 30 5 399 2 GDH2 Glutamate dehydrogenase 2, mitochondrial Oryza sativa subsp. japonica
A2XW22 5.79e-46 167 30 5 399 3 GDH2 Glutamate dehydrogenase 2, mitochondrial Oryza sativa subsp. indica
P93541 7.06e-46 167 29 5 403 2 GDH1 Glutamate dehydrogenase Solanum lycopersicum
Q6H3Y7 1.12e-45 166 28 5 402 2 GDH3 Glutamate dehydrogenase 3, mitochondrial Oryza sativa subsp. japonica
P27346 1.55e-45 166 32 8 397 3 gluD NAD-specific glutamate dehydrogenase Clostridioides difficile
Q38946 3.51e-45 165 29 5 399 1 GDH2 Glutamate dehydrogenase 2 Arabidopsis thaliana
P39475 7.63e-45 164 29 5 402 3 gdhA NADP-specific glutamate dehydrogenase Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12)
Q9LEC8 2.69e-44 162 29 5 388 2 GDHB Glutamate dehydrogenase B Nicotiana plumbaginifolia
P29051 1.81e-43 161 30 4 400 1 gdhX NAD-specific glutamate dehydrogenase A Halobacterium salinarum
F2Z610 3.1e-43 160 32 5 361 3 gdhA2 Glutamate dehydrogenase A2 Halobacterium salinarum
Q9HQE1 3.1e-43 160 32 5 361 3 gdhA2 Glutamate dehydrogenase A2 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Q852M0 2.67e-42 157 29 6 405 2 GDH1 Glutamate dehydrogenase 1, mitochondrial Oryza sativa subsp. japonica
A2XMV1 2.67e-42 157 29 6 405 3 GDH1 Glutamate dehydrogenase 1, mitochondrial Oryza sativa subsp. indica
P50735 3.58e-42 157 29 6 393 1 gudB Cryptic catabolic NAD-specific glutamate dehydrogenase GudB Bacillus subtilis (strain 168)
Q9YC65 3.77e-42 157 31 7 374 3 gdhA Glutamate dehydrogenase Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P54386 6.55e-42 156 28 5 399 3 gdhA NADP-specific glutamate dehydrogenase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P28997 2.77e-41 155 31 4 358 1 None NAD-specific glutamate dehydrogenase Peptoniphilus asaccharolyticus
Q43260 3.2e-41 154 29 6 410 1 GDH1 Glutamate dehydrogenase Zea mays
P0DMG3 6.06e-40 151 29 4 397 3 gdhB Glutamate dehydrogenase B Halobacterium salinarum
P0DMG4 6.06e-40 151 29 4 397 3 gdhB Glutamate dehydrogenase B Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
O59650 6.34e-40 151 29 10 418 1 gdhA Glutamate dehydrogenase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
P49448 8.63e-33 133 28 11 385 1 GLUD2 Glutamate dehydrogenase 2, mitochondrial Homo sapiens
P00366 1.44e-32 133 29 10 371 1 GLUD1 Glutamate dehydrogenase 1, mitochondrial Bos taurus
Q64HZ9 1.96e-32 132 29 9 360 3 GLUD2 Glutamate dehydrogenase 2, mitochondrial Hylobates lar
Q64HZ8 2.23e-32 132 29 10 366 3 GLUD2 Glutamate dehydrogenase 2, mitochondrial Pan troglodytes
P10860 5.33e-32 131 30 10 360 1 Glud1 Glutamate dehydrogenase 1, mitochondrial Rattus norvegicus
P26443 5.59e-32 131 30 10 360 1 Glud1 Glutamate dehydrogenase 1, mitochondrial Mus musculus
Q64I00 6.04e-32 131 29 10 371 3 GLUD2 Glutamate dehydrogenase 2, mitochondrial Pongo pygmaeus
P42174 6.53e-32 131 29 9 360 1 GLUD1 Glutamate dehydrogenase 1, mitochondrial Sus scrofa
P00367 7.69e-32 130 29 10 371 1 GLUD1 Glutamate dehydrogenase 1, mitochondrial Homo sapiens
Q64I01 4.08e-31 129 29 11 376 3 GLUD2 Glutamate dehydrogenase 2, mitochondrial Gorilla gorilla gorilla
P00368 5.3e-31 128 29 13 382 1 GLUD1 Glutamate dehydrogenase 1, mitochondrial (Fragment) Gallus gallus
Q54KB7 1.67e-30 126 26 11 433 1 gluD Glutamate dehydrogenase, mitochondrial Dictyostelium discoideum
P82264 1.64e-29 123 28 12 410 1 glud1 Glutamate dehydrogenase, mitochondrial Chaenocephalus aceratus
P54385 2.16e-27 118 28 9 359 1 Gdh Glutamate dehydrogenase, mitochondrial Drosophila melanogaster
Q53199 1.22e-20 97 28 13 352 3 NGR_a01340 Probable glutamate dehydrogenase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q59771 2.86e-07 55 25 13 331 1 pdh Phenylalanine dehydrogenase Rhodococcus sp.
W8CV45 1.96e-06 53 24 11 328 1 nptrpdh L-tryptophan dehydrogenase Nostoc punctiforme
O69056 8.63e-06 51 27 12 303 1 vdh Valine dehydrogenase Streptomyces albus (strain ATCC 21838 / DSM 41398 / FERM P-419 / JCM 4703 / NBRC 107858)
P13154 1.38e-05 50 25 14 337 1 ldh Leucine dehydrogenase Geobacillus stearothermophilus
B2IXH4 3.39e-05 49 23 10 328 1 Npun_R1275 L-tryptophan dehydrogenase Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Q06539 4.29e-05 49 26 12 303 1 vdh Valine dehydrogenase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q60030 4.54e-05 48 27 13 322 1 ldh Leucine dehydrogenase Thermoactinomyces intermedius
P0A392 0.000278 46 25 16 359 3 ldh Leucine dehydrogenase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P0A393 0.000278 46 25 16 359 1 ldh Leucine dehydrogenase Bacillus cereus

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_14660
Feature type CDS
Gene gdhA
Product NADP-specific glutamate dehydrogenase
Location 18902 - 20242 (strand: -1)
Length 1341 (nucleotides) / 446 (amino acids)

Contig

Accession ZDB_225
Length 129223 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1582
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0334 Amino acid transport and metabolism (E) E Glutamate dehydrogenase/leucine dehydrogenase

Kegg Ortholog Annotation(s)

Protein Sequence

MSNFISLETFLENVQRRDPSQPEFLQAVREVFSTLWPFLEKNPQYRDQNLLARFVEPERVIQFRVTWVDDQGQVQVNRAWRVQFSSAIGPFKGGMRFHPSVNLSILKFLGFEQTLKNALTTLPMGGGKGGSDFDPKGKSQGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGYMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTQAMLERHGMSFDGMRVAVSGSGNVAQYTIEKCLSLGAKVITASDSSGTVVDEDGFTAEKLARLTEIKDRYGRVEEYAKEFGLVYLKDQTPWAAPVDIALPCATQNELDLADAEVLIKNGVKAVAEGANMPTTIPATDAFLAANVLFAPGKAANAGGVATSGLEMSQNSVRLGWKREVVDERLHHIMLDIHNACVEYGSEEKQTNYVQGANIAGFVKVADAMLAQGVL

Flanking regions ( +/- flanking 50bp)

CTGCATAACTGCTGCATGAATGAGAAGGGCATGACAGACAGGAAATCAACATGAGTAACTTTATCTCTTTGGAAACGTTTCTGGAAAATGTTCAGCGCCGTGACCCGTCACAGCCGGAATTTCTCCAGGCGGTGCGCGAAGTTTTCTCCACGCTATGGCCATTCCTTGAAAAGAATCCGCAGTACCGCGATCAGAACCTGCTCGCCCGCTTTGTTGAGCCGGAGCGCGTAATTCAGTTCCGTGTGACCTGGGTTGACGATCAGGGTCAGGTGCAGGTAAACCGCGCATGGCGTGTGCAGTTCAGCTCCGCTATCGGCCCGTTCAAAGGCGGCATGCGCTTCCATCCGTCCGTAAACCTCTCCATCCTCAAATTCCTCGGCTTTGAGCAGACACTGAAAAATGCCCTGACCACACTGCCGATGGGTGGCGGGAAAGGCGGCTCTGACTTTGATCCGAAAGGCAAAAGCCAGGGCGAAGTGATGCGTTTCTGCCAGGCGCTGATGACCGAGCTGTACCGTCATCTGGGCGCAGATACGGATGTCCCTGCGGGTGATATCGGCGTCGGCGGCCGTGAAGTCGGCTACATGGCGGGGATGATGAAAAAACTGTCCAACAACACCGCCTGTGTGTTTACCGGCAAAGGTCTCTCCTTCGGCGGCAGTCTGATCCGTCCGGAAGCCACCGGTTACGGGCTGGTTTACTTTACTCAGGCCATGCTGGAACGCCACGGGATGAGTTTCGACGGTATGCGTGTTGCGGTTTCCGGCTCCGGTAACGTGGCGCAGTACACCATCGAAAAATGCCTGTCACTGGGTGCGAAAGTGATCACTGCATCTGACTCCTCCGGTACCGTAGTTGACGAAGACGGTTTCACCGCCGAAAAACTGGCGCGTCTGACCGAAATCAAAGACCGTTACGGCCGTGTGGAAGAGTATGCGAAAGAGTTCGGCCTGGTGTATCTGAAAGATCAGACCCCGTGGGCTGCTCCGGTGGATATCGCTCTGCCGTGCGCCACTCAGAACGAGCTGGATCTGGCTGATGCTGAAGTGCTGATCAAAAACGGCGTTAAAGCCGTGGCGGAAGGCGCAAACATGCCGACCACTATCCCGGCAACCGATGCCTTCCTGGCGGCAAATGTCCTGTTTGCACCGGGCAAAGCAGCGAATGCGGGCGGCGTGGCAACATCCGGCCTGGAAATGTCACAAAACTCAGTCCGTCTCGGCTGGAAACGTGAAGTGGTGGATGAGCGTCTGCATCACATCATGCTGGATATCCACAATGCATGCGTTGAGTACGGCAGTGAAGAAAAACAGACCAACTATGTGCAGGGTGCGAATATTGCCGGCTTTGTGAAAGTCGCTGATGCCATGCTGGCGCAGGGTGTGCTGTAAGTCTGTAAGCTGTTACTGAAAAACGTCACAGTGTCGAAGGGGGTATAACA