Homologs in group_1305

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07990 FBDBKF_07990 100.0 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
NLDBIP_14265 NLDBIP_14265 100.0 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_08585 LHKJJB_08585 100.0 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_08135 HKOGLL_08135 100.0 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS12995 F4V73_RS12995 64.4 Morganella psychrotolerans - HlyD family type I secretion periplasmic adaptor subunit
PMI_RS01345 PMI_RS01345 47.4 Proteus mirabilis HI4320 - HlyD family type I secretion periplasmic adaptor subunit

Distribution of the homologs in the orthogroup group_1305

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1305

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q03025 1.34e-85 271 37 3 428 3 aprE Alkaline protease secretion protein AprE Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P23597 9.65e-85 269 36 3 421 3 prtE Proteases secretion protein PrtE Dickeya chrysanthemi
Q7ANN5 1.24e-52 185 30 7 420 1 prsE Type I secretion system membrane fusion protein PrsE Rhizobium meliloti (strain 1021)
Q08633 6.88e-17 86 25 15 438 3 apxIIID RTX-III toxin determinant D Actinobacillus pleuropneumoniae
P26761 3.36e-14 77 25 12 433 3 apxID RTX-I toxin determinant D Actinobacillus pleuropneumoniae
P18790 4.36e-14 77 23 9 442 1 ltxD Leukotoxin export protein LtxD Aggregatibacter actinomycetemcomitans
P0DKX9 1.81e-12 72 25 8 400 3 cyaD Protein CyaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
J7QCA7 1.81e-12 72 25 8 400 3 cyaD Protein CyaD Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
P09986 2.04e-12 72 22 8 406 1 hlyD Hemolysin secretion protein D, chromosomal Escherichia coli
P06739 8.87e-12 70 23 11 426 1 hlyD Hemolysin secretion protein D, plasmid Escherichia coli
P16534 1.16e-11 70 27 5 248 3 lktD Leukotoxin secretion protein D Mannheimia haemolytica
P55125 2.51e-11 68 28 5 240 3 lktD Leukotoxin secretion protein D Pasteurella haemolytica-like sp. (strain 5943B)
P22519 0.000316 46 22 15 328 1 cvaA Colicin V secretion protein CvaA Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_13820
Feature type CDS
Gene emrA
Product Multidrug resistance efflux pump EmrA
Location 104121 - 105428 (strand: 1)
Length 1308 (nucleotides) / 435 (amino acids)

Contig

Accession ZDB_223
Length 138954 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1305
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13437 HlyD family secretion protein
PF13533 Biotin-lipoyl like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1566 Defense mechanisms (V) V Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12537 membrane fusion protein, type I secretion system - -

Protein Sequence

MITKWLSAAPGVKTDTGGYQRAGKYGVVLGLAGFLLWAGFAPLDQGVAASGTVVIAGNIKQVQSPADGVISEIYVQNGQRAEKDQVLVRLRPVQSQAQAVSLAEQLDSTLLIQRRLEAELRGEAAFTPAADDVFYAPPAYGRALLQAQNALLTDRRLELESEIQACQITVDGLTQRLITLREIARSTAQQADSLTAQAVNLKSLADEGYLPRHRYQEIRRESAALRNQADDTRLQISRAEEEKAAQTEQITQRRAAFHSGIREELSRLSVQRSELKKQQIIENDRLEQHVITAPVTGTVMDVSVFTAGGVVQAGEKLMSVVPEQQTLIIEGKLSPQWIDKVAPGQSADLLFTAFNQNLTPKLRGELTMISADRLINPANGEPYYQIQIAVPETAAAQEIKPGMPAEIFIRTGERSLLSYLFKPVTDRLFFALTEE

Flanking regions ( +/- flanking 50bp)

TCCGGCGGAGAAGGTCATTGAAACACTTAATAATCAGGCGGGTAAAAATAATGATCACTAAATGGTTGTCTGCGGCGCCGGGGGTAAAAACCGATACCGGCGGGTATCAGCGCGCGGGGAAATATGGGGTTGTCCTGGGCCTTGCCGGTTTTTTGTTGTGGGCGGGATTTGCACCGCTTGATCAGGGCGTTGCCGCATCAGGAACGGTTGTGATTGCCGGTAATATCAAGCAGGTGCAGTCTCCGGCGGATGGCGTGATTTCTGAGATTTATGTGCAAAACGGCCAGCGGGCGGAAAAAGATCAGGTGCTGGTACGGCTGCGTCCGGTGCAGTCTCAGGCTCAGGCAGTATCGCTGGCAGAGCAGCTCGACAGCACACTGCTGATACAGCGGCGGCTGGAGGCAGAGCTGCGTGGTGAAGCGGCATTTACCCCGGCGGCGGATGATGTCTTTTATGCGCCGCCCGCGTATGGCCGGGCACTGTTACAGGCGCAGAATGCGCTGCTCACAGACCGGCGGCTTGAACTGGAGAGTGAGATTCAGGCATGTCAGATCACGGTTGACGGCCTGACGCAGCGGCTTATCACTCTGCGGGAGATTGCCCGCAGCACTGCGCAACAGGCGGACAGCCTGACGGCACAGGCGGTAAATCTTAAATCGCTGGCGGATGAGGGGTATCTGCCGCGCCACCGCTATCAGGAGATCCGGCGGGAAAGTGCGGCACTGCGCAATCAGGCGGATGACACCCGGTTACAGATAAGCCGTGCAGAGGAAGAAAAAGCCGCGCAGACAGAGCAGATCACACAGCGGCGGGCAGCTTTTCACAGCGGGATCCGCGAGGAGTTATCGCGTCTGTCAGTTCAGCGCAGTGAGCTGAAAAAACAACAGATTATCGAAAACGATCGGCTGGAACAGCATGTTATCACCGCGCCGGTGACCGGCACTGTTATGGATGTGTCCGTGTTTACCGCAGGCGGTGTGGTGCAAGCCGGGGAAAAACTGATGTCGGTGGTGCCGGAACAGCAGACGCTGATTATTGAAGGCAAATTATCACCGCAGTGGATAGATAAAGTCGCCCCCGGTCAGTCTGCGGATCTGCTGTTTACCGCCTTCAATCAGAACCTGACCCCAAAACTGCGCGGCGAACTGACAATGATCTCCGCCGATCGTCTGATAAATCCGGCAAACGGGGAACCTTACTATCAGATCCAGATCGCGGTGCCGGAAACGGCGGCGGCTCAGGAGATCAAACCCGGTATGCCCGCTGAGATTTTTATCCGCACCGGTGAACGGTCTCTGCTCAGTTATCTGTTTAAGCCTGTGACTGACCGGCTCTTTTTCGCACTGACCGAGGAGTGATCTGTATGCATTCTGCAAAACGCCTTTTTGCGGCACTGTTGTGTCTGTTA