Orthogroup:group_1305


Homologs in group_1305

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07260 FBDBKF_07260 Morganella morganii S1 asnS asparagine--tRNA ligase
EHELCC_03710 EHELCC_03710 Morganella morganii S2 asnS asparagine--tRNA ligase
NLDBIP_03710 NLDBIP_03710 Morganella morganii S4 asnS asparagine--tRNA ligase
LHKJJB_09540 LHKJJB_09540 Morganella morganii S3 asnS asparagine--tRNA ligase
HKOGLL_09435 HKOGLL_09435 Morganella morganii S5 asnS asparagine--tRNA ligase
F4V73_RS01445 F4V73_RS01445 Morganella psychrotolerans asnS asparagine--tRNA ligase
PMI_RS03765 PMI_RS03765 Proteus mirabilis HI4320 asnS asparagine--tRNA ligase

Distribution of group_1305 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1305 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1305

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1305.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 asnS 7

Product

# Product Occurence
1 asparagine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0017 7 J Translation, ribosomal structure and biogenesis (J) Aspartyl/asparaginyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01893 7 asparaginyl-tRNA synthetase [EC:6.1.1.22] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00152 7 tRNA synthetases class II (D, K and N)
PF01336 7 OB-fold nucleic acid binding domain

Annotations of the 567 SwissProt hits

Annotation Number of occurrences
Asparagine--tRNA ligase 262
Asparagine--tRNA ligase 1 1
Asparagine--tRNA ligase 2 1
Asparagine--tRNA ligase, chloroplastic/mitochondrial 1
Asparagine--tRNA ligase, cytoplasmic 9
Asparagine--tRNA ligase, cytoplasmic (Fragment) 1
Asparagine--tRNA ligase, cytoplasmic 1 1
Asparagine--tRNA ligase, cytoplasmic 2 1
Asparagine--tRNA ligase, cytoplasmic 3 1
Asparagine--tRNA ligase, mitochondrial 2
Asparaginyl-tRNA synthetase 2
Aspartate--tRNA ligase 50
Aspartate--tRNA ligase 1, cytoplasmic 1
Aspartate--tRNA ligase 2, cytoplasmic 1
Aspartate--tRNA ligase, cytoplasmic 8
Aspartate--tRNA ligase, cytoplasmic 1 1
Aspartate--tRNA(Asp) ligase 9
Aspartate--tRNA(Asp/Asn) ligase 103
Lysine--tRNA ligase 100
Lysine--tRNA ligase 2 1
Lysine--tRNA ligase, heat inducible 3
Lysine--tRNA ligase, mitochondrial 1
Probable asparagine--tRNA ligase, cytoplasmic 4
Probable asparagine--tRNA ligase, mitochondrial 1
Probable aspartate--tRNA ligase, cytoplasmic 2

Protein length

Unique protein length 466

Protein length distribution