Homologs in group_1348

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08350 FBDBKF_08350 100.0 Morganella morganii S1 yigA DUF484 domain-containing protein
NLDBIP_13515 NLDBIP_13515 100.0 Morganella morganii S4 yigA DUF484 domain-containing protein
LHKJJB_13040 LHKJJB_13040 100.0 Morganella morganii S3 yigA DUF484 domain-containing protein
HKOGLL_11990 HKOGLL_11990 100.0 Morganella morganii S5 yigA DUF484 domain-containing protein
F4V73_RS09550 F4V73_RS09550 83.1 Morganella psychrotolerans - DUF484 family protein
PMI_RS16600 PMI_RS16600 49.6 Proteus mirabilis HI4320 - DUF484 domain-containing protein

Distribution of the homologs in the orthogroup group_1348

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1348

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23305 1.16e-75 231 51 0 220 4 yigA Uncharacterized protein YigA Escherichia coli (strain K12)
Q83IW8 1.87e-75 231 50 0 220 4 yigA Uncharacterized protein YigA Shigella flexneri
P55886 1.44e-73 226 49 0 218 4 yigA Uncharacterized protein YigA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_13175
Feature type CDS
Gene yigA
Product DUF484 domain-containing protein
Location 117919 - 118629 (strand: -1)
Length 711 (nucleotides) / 236 (amino acids)

Contig

Accession ZDB_222
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1348
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04340 Protein of unknown function, DUF484

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3159 Function unknown (S) S Uncharacterized conserved protein YigA, DUF484 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09921 uncharacterized protein - -

Protein Sequence

MDSQQDTAVFAPSGEPDEEAVLAYLKAHPDFFIRNAAQITDMTIPHPVKGAVSLVEWQLGRQRERIGTLTDDLMQLMIQARENEHLFSRLLKLLASLSAATSLDDFSERLNQWAKGLKLSHARIRLFTDSWRLGAPFRHQDLALSRAHFEAIRLSRFGDRNHYLGQLTAPEIQLLLPDSAFVGSASVSLLGGQHDLGVVIFVSRDKQHYQKDMGTAMLEQVAYFLPQLLQRWVELA

Flanking regions ( +/- flanking 50bp)

TATATGATGGTGTTATCCATCTTTAATCATCATAAAGAGGATAAATAGCAATGGACAGTCAACAGGATACGGCCGTATTTGCCCCTTCCGGAGAGCCGGATGAGGAGGCGGTGCTGGCGTATCTGAAAGCGCATCCGGATTTTTTCATCCGCAATGCCGCGCAGATCACTGACATGACCATCCCGCACCCGGTAAAAGGTGCGGTCTCTCTGGTGGAGTGGCAGCTCGGACGCCAGCGTGAGCGGATAGGCACGCTGACGGATGATCTGATGCAGCTGATGATACAGGCCCGTGAAAACGAACACCTGTTCTCGCGCCTGCTGAAACTGCTGGCGTCGCTGTCCGCCGCGACTTCTCTTGATGATTTTTCCGAACGCCTGAATCAGTGGGCGAAGGGGCTGAAACTCAGTCATGCCAGAATCCGTCTGTTTACTGACAGCTGGCGGCTGGGTGCGCCGTTCCGTCATCAGGATCTGGCCTTATCCCGCGCACACTTTGAAGCCATCCGTCTCTCCCGCTTCGGGGATCGCAACCATTATCTGGGACAACTGACCGCCCCTGAAATTCAGCTGCTGCTGCCGGACAGTGCATTTGTCGGTTCAGCGTCTGTATCGCTGCTGGGCGGACAGCATGACCTCGGTGTAGTGATATTTGTCAGCCGTGACAAGCAGCACTATCAGAAAGATATGGGTACCGCGATGCTGGAACAGGTAGCCTATTTCCTGCCGCAGCTGCTGCAGCGCTGGGTGGAGCTGGCATGACGGACAGCGCGGCAGATGACCTGCTGGTCACGGCAGAACAGTTTCTGCAG