Orthogroup:group_1404


Homologs in group_1404

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08670 FBDBKF_08670 Morganella morganii S1 infB translation initiation factor IF-2
EHELCC_12855 EHELCC_12855 Morganella morganii S2 infB translation initiation factor IF-2
NLDBIP_13195 NLDBIP_13195 Morganella morganii S4 infB translation initiation factor IF-2
LHKJJB_13360 LHKJJB_13360 Morganella morganii S3 infB translation initiation factor IF-2
HKOGLL_11670 HKOGLL_11670 Morganella morganii S5 infB translation initiation factor IF-2
F4V73_RS09895 F4V73_RS09895 Morganella psychrotolerans infB translation initiation factor IF-2
PMI_RS17025 PMI_RS17025 Proteus mirabilis HI4320 infB translation initiation factor IF-2

Distribution of group_1404 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1404 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1404

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1404.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 infB 7

Product

# Product Occurence
1 translation initiation factor IF-2 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0532 7 J Translation, ribosomal structure and biogenesis (J) Translation initiation factor IF-2, a GTPase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02519 7 translation initiation factor IF-2 - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00009 7 Elongation factor Tu GTP binding domain
PF03144 7 Elongation factor Tu domain 2
PF04760 7 Translation initiation factor IF-2, N-terminal region
PF08364 7 Bacterial translation initiation factor IF-2 associated region
PF11987 7 Translation-initiation factor 2
PF22042 7 Elongation factor G domain 2

Annotations of the 525 SwissProt hits

Annotation Number of occurrences
Translation initiation factor IF-2 525

Protein length

Min length 910
Max length 916
Mean length (sd) 911.0 (2.2)
Median length 910.0

Protein length distribution