Homologs in group_2016

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15140 FBDBKF_15140 100.0 Morganella morganii S1 nqrC Na(+)-translocating NADH-quinone reductase subunit C
NLDBIP_11450 NLDBIP_11450 100.0 Morganella morganii S4 nqrC Na(+)-translocating NADH-quinone reductase subunit C
LHKJJB_11310 LHKJJB_11310 100.0 Morganella morganii S3 nqrC Na(+)-translocating NADH-quinone reductase subunit C
HKOGLL_09920 HKOGLL_09920 100.0 Morganella morganii S5 nqrC Na(+)-translocating NADH-quinone reductase subunit C
F4V73_RS12305 F4V73_RS12305 93.9 Morganella psychrotolerans - Na(+)-translocating NADH-quinone reductase subunit C
PMI_RS01695 PMI_RS01695 76.2 Proteus mirabilis HI4320 - Na(+)-translocating NADH-quinone reductase subunit C

Distribution of the homologs in the orthogroup group_2016

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2016

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZBZ2 1.01e-110 323 59 2 266 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Yersinia pestis
Q56582 3.77e-98 290 54 4 257 1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio alginolyticus
P0C6E0 1.26e-93 279 53 4 257 1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F5Y7 1.26e-93 279 53 4 257 1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9CLA9 6.65e-93 277 50 0 258 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Pasteurella multocida (strain Pm70)
Q75R62 8.81e-93 276 52 4 257 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio anguillarum
Q87MA8 4.03e-92 275 51 4 262 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q7MIC9 1.49e-91 273 53 4 257 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio vulnificus (strain YJ016)
Q8DBJ4 1.49e-91 273 53 4 257 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio vulnificus (strain CMCP6)
Q9RFV9 2.6e-89 268 51 4 262 1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Vibrio campbellii (strain ATCC BAA-1116)
Q7VNU7 4.33e-87 262 49 1 253 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Haemophilus ducreyi (strain 35000HP / ATCC 700724)
P43957 3.5e-84 254 50 2 253 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9JVQ0 9.25e-76 233 44 2 254 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q9K0M5 1.18e-74 231 44 2 254 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9HZK8 4.75e-68 214 45 4 259 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O84281 1.39e-25 105 29 9 281 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9PKB5 2.75e-22 97 31 9 228 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Chlamydia muridarum (strain MoPn / Nigg)
Q823P3 4.94e-21 93 30 4 216 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)
Q9Z8B5 9.97e-19 87 27 4 214 3 nqrC Na(+)-translocating NADH-quinone reductase subunit C Chlamydia pneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_11105
Feature type CDS
Gene nqrC
Product Na(+)-translocating NADH-quinone reductase subunit C
Location 44815 - 45609 (strand: -1)
Length 795 (nucleotides) / 264 (amino acids)

Contig

Accession ZDB_220
Length 188522 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2016
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04205 FMN-binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2869 Energy production and conversion (C) C Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00348 Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] - -

Protein Sequence

MANEKTKNKDSVARTFIVVFVLCLVCSIVVAGSAVGLKSTQQTQIMLDKQRNILDVAGLLTPSMPADEIDAVYKKFIRAKMVDLKTGQMSDSTGKYDLNDELRSDETSIALSPEEDLAKIRRRANSAEIYLVQNEQGETSKIVLPVYGSGLWSVMYAFVAIDVDGITSEGITYYQHGETPGLGGEVDNPQWRKQWIGKKLFNEEGMPAIKIVRSGATDSPYGIDGLSGATLTSNGIQHMFDFWLGDNGFGPFLKTVREGALNHG

Flanking regions ( +/- flanking 50bp)

GTTATTTGATTATCTGGTGGTTCAGGCAAACATTAAACGGAGAAAAGCACGTGGCTAATGAAAAAACGAAAAACAAGGACAGTGTCGCAAGAACGTTTATCGTTGTCTTCGTCCTTTGCCTTGTGTGTTCAATAGTTGTGGCCGGTTCTGCTGTGGGACTGAAGTCCACGCAGCAGACCCAGATTATGCTGGATAAGCAGCGTAACATTCTGGATGTGGCCGGGTTACTGACGCCATCCATGCCGGCAGACGAAATCGATGCAGTCTATAAAAAATTCATCAGAGCAAAAATGGTGGATTTAAAAACCGGTCAGATGAGCGACAGCACCGGCAAATACGATCTCAACGATGAACTGCGCAGTGATGAGACCAGTATTGCCCTGTCACCGGAAGAAGATCTGGCGAAAATCCGCCGCCGTGCCAACAGCGCGGAAATCTATCTGGTACAGAATGAGCAGGGTGAAACCAGCAAGATTGTTCTGCCGGTTTACGGTTCCGGTCTGTGGTCGGTGATGTATGCCTTTGTCGCGATTGATGTCGACGGTATCACCTCCGAGGGGATCACTTACTACCAGCACGGTGAAACGCCGGGGCTGGGCGGTGAGGTGGATAACCCGCAATGGCGTAAACAGTGGATTGGTAAAAAGCTGTTTAATGAAGAAGGTATGCCGGCTATCAAAATAGTCCGCAGTGGCGCCACTGACAGCCCGTACGGCATTGATGGTTTATCCGGTGCGACACTGACCTCAAACGGCATCCAGCATATGTTTGATTTCTGGCTGGGCGACAACGGTTTTGGCCCGTTCCTGAAAACAGTACGCGAAGGAGCGTTGAATCATGGCTGATAGTAAAGAAATTAAGCGCGTTCTTCTCGGACCGTTATTAGATAACAACC