Homologs in group_2813

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09450 FBDBKF_09450 100.0 Morganella morganii S1 tPR TPR repeat
NLDBIP_10305 NLDBIP_10305 100.0 Morganella morganii S4 tPR TPR repeat
LHKJJB_11050 LHKJJB_11050 100.0 Morganella morganii S3 tPR TPR repeat
HKOGLL_14110 HKOGLL_14110 100.0 Morganella morganii S5 tPR TPR repeat
F4V73_RS10530 F4V73_RS10530 56.9 Morganella psychrotolerans - sel1 repeat family protein

Distribution of the homologs in the orthogroup group_2813

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2813

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_09960
Feature type CDS
Gene tPR
Product TPR repeat
Location 26583 - 26921 (strand: 1)
Length 339 (nucleotides) / 112 (amino acids)

Contig

Accession ZDB_219
Length 213167 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2813
Orthogroup size 6
N. genomes 6

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0790 General function prediction only (R) R TPR repeat

Protein Sequence

MKIYSRILIALLFIPLLCSAGTPPQNVELLSIKAGQGETNAQFLLGTLYLTGRYGVNKDIEKGKYYLLIAAGKGDSDAKRFLALQYYNEKNYFAFLNLFSEYCLDIIEQNPD

Flanking regions ( +/- flanking 50bp)

AAATCAAAAATAATCTTTACCCCGGCACACTGTTAACGGATAAAGGAAAAATGAAAATATATTCCCGGATTTTGATAGCGCTGCTTTTTATCCCGTTACTTTGTTCTGCGGGGACGCCGCCGCAAAATGTTGAGCTGCTGAGTATAAAAGCAGGGCAGGGAGAGACAAATGCTCAGTTTTTACTGGGAACGTTGTATCTCACCGGACGTTACGGTGTGAACAAAGATATTGAAAAGGGAAAGTATTATTTGCTTATTGCGGCCGGAAAAGGCGATTCAGATGCAAAACGTTTTTTGGCGCTTCAGTATTATAATGAAAAAAACTATTTTGCATTTCTTAATCTGTTTTCTGAGTATTGCCTGGATATTATTGAACAGAACCCTGACTGATAATAAACAGAGACTAAAAAGGCTTGTATTAACTGCAAGCCTTTTTTATT