Homologs in group_2608

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03480 FBDBKF_03480 100.0 Morganella morganii S1 livK ABC-type branched-chain amino acid transport system, periplasmic component
NLDBIP_07380 NLDBIP_07380 100.0 Morganella morganii S4 livK ABC-type branched-chain amino acid transport system, periplasmic component
LHKJJB_06915 LHKJJB_06915 100.0 Morganella morganii S3 livK ABC-type branched-chain amino acid transport system, periplasmic component
HKOGLL_04015 HKOGLL_04015 100.0 Morganella morganii S5 livK ABC-type branched-chain amino acid transport system, periplasmic component
F4V73_RS11415 F4V73_RS11415 93.8 Morganella psychrotolerans - branched-chain amino acid ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_2608

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2608

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25399 0.0 563 73 1 360 3 livJ Leu/Ile/Val-binding protein Citrobacter freundii
P04816 0.0 563 72 1 367 1 livK Leucine-specific-binding protein Escherichia coli (strain K12)
P17215 0.0 562 73 1 359 1 livJ Leu/Ile/Val/Thr-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AD96 0.0 561 74 1 360 1 livJ Leu/Ile/Val-binding protein Escherichia coli (strain K12)
P0AD97 0.0 561 74 1 360 3 livJ Leu/Ile/Val-binding protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AD98 0.0 561 74 1 360 3 livJ Leu/Ile/Val-binding protein Escherichia coli O157:H7
P0A1W6 0.0 561 72 1 367 1 livK Leucine-specific-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1W7 0.0 561 72 1 367 3 livK Leucine-specific-binding protein Salmonella typhi
P21175 1.46e-150 432 55 2 372 1 braC Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9HUQ0 7.21e-97 295 43 4 372 1 PA4913 Amino acid binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8YEE8 7.11e-89 275 40 4 356 1 BMEI1930 Leu/Ile/Val-binding protein homolog 3 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8G3D4 1.06e-88 275 40 4 358 3 BR0014 Leu/Ile/Val-binding protein homolog 3 Brucella suis biovar 1 (strain 1330)
Q1MDE9 5.65e-86 267 41 5 361 1 braC3 Leu/Ile/Val-binding protein BraC3 Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q8YJ23 1.86e-85 266 42 6 367 3 BMEI0263 Leu/Ile/Val-binding protein homolog 1 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q57B99 2.31e-85 266 41 4 363 3 BruAb1_1767 Leu/Ile/Val-binding protein homolog 1 Brucella abortus biovar 1 (strain 9-941)
Q2YLF8 2.31e-85 266 41 4 363 3 BAB1_1794 Leu/Ile/Val-binding protein homolog 1 Brucella abortus (strain 2308)
Q8FYS6 2.46e-85 266 42 6 367 3 BR1785 Leu/Ile/Val-binding protein homolog 1 Brucella suis biovar 1 (strain 1330)
Q57BA1 1.81e-78 248 40 6 366 3 BruAb1_1765 Leu/Ile/Val-binding protein homolog 2 Brucella abortus biovar 1 (strain 9-941)
Q2YLG0 1.81e-78 248 40 6 366 3 BAB1_1792 Leu/Ile/Val-binding protein homolog 2 Brucella abortus (strain 2308)
Q8FYS9 2.81e-78 248 39 4 362 3 BR1782 Leu/Ile/Val-binding protein homolog 2 Brucella suis biovar 1 (strain 1330)
Q8YJ22 5.06e-77 244 38 4 362 3 BMEI0264 Leu/Ile/Val-binding protein homolog 2 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FWQ3 6.11e-19 90 28 4 245 3 BRA0392 Leu/Ile/Val-binding protein homolog 8 Brucella suis biovar 1 (strain 1330)
Q577J0 7.59e-19 90 29 3 225 3 BruAb2_0801 Leu/Ile/Val-binding protein homolog 7 Brucella abortus biovar 1 (strain 9-941)
Q2YK58 7.59e-19 90 29 3 225 3 BAB2_0822 Leu/Ile/Val-binding protein homolog 7 Brucella abortus (strain 2308)
Q8YBN1 1.13e-18 90 29 3 225 3 BMEII0868 Leu/Ile/Val-binding protein homolog 7 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FWP6 1.15e-18 90 29 3 225 3 BRA0400 Leu/Ile/Val-binding protein homolog 7 Brucella suis biovar 1 (strain 1330)
Q577I2 2.16e-18 89 27 4 245 3 BruAb2_0809 Leu/Ile/Val-binding protein homolog 8 Brucella abortus biovar 1 (strain 9-941)
Q2YK50 2.16e-18 89 27 4 245 3 BAB2_0830 Leu/Ile/Val-binding protein homolog 8 Brucella abortus (strain 2308)
Q8YBM4 2.39e-18 89 27 4 245 3 BMEII0875 Leu/Ile/Val-binding protein homolog 8 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8YDV4 4.7e-11 67 25 12 348 3 BMEII0070 Leu/Ile/Val-binding protein homolog 4 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FXP1 9.42e-11 66 26 12 346 3 BRA0024 Leu/Ile/Val-binding protein homolog 4 Brucella suis biovar 1 (strain 1330)
Q57A58 9.42e-11 66 26 12 346 3 BruAb2_0024 Leu/Ile/Val-binding protein homolog 4 Brucella abortus biovar 1 (strain 9-941)
Q2YL86 9.42e-11 66 26 12 346 3 BAB2_0023 Leu/Ile/Val-binding protein homolog 4 Brucella abortus (strain 2308)
Q8YDS2 7.55e-09 60 24 6 236 3 BMEII0103 Leu/Ile/Val-binding protein homolog 5 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q576D4 7.55e-09 60 24 6 236 3 BruAb2_1129 Leu/Ile/Val-binding protein homolog 5 Brucella abortus biovar 1 (strain 9-941)
Q2YJA9 7.55e-09 60 24 6 236 3 BAB2_1153 Leu/Ile/Val-binding protein homolog 5 Brucella abortus (strain 2308)
Q8FUM7 8.12e-09 60 24 6 236 3 BRA1193 Leu/Ile/Val-binding protein homolog 5 Brucella suis biovar 1 (strain 1330)
Q578E0 9.92e-08 57 27 7 226 3 BruAb2_0578 Leu/Ile/Val-binding protein homolog 6 Brucella abortus biovar 1 (strain 9-941)
Q2YKQ9 9.92e-08 57 27 7 226 3 BAB2_0593 Leu/Ile/Val-binding protein homolog 6 Brucella abortus (strain 2308)
Q8YC99 1.09e-07 57 27 7 226 3 BMEII0633 Leu/Ile/Val-binding protein homolog 6 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FW17 1.17e-07 56 27 7 226 3 BRA0648 Leu/Ile/Val-binding protein homolog 6 Brucella suis biovar 1 (strain 1330)
Q7XP59 7.79e-05 48 23 3 189 1 GLR3.1 Glutamate receptor 3.1 Oryza sativa subsp. japonica

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_07055
Feature type CDS
Gene livK
Product ABC-type branched-chain amino acid transport system, periplasmic component
Location 144532 - 145644 (strand: 1)
Length 1113 (nucleotides) / 370 (amino acids)

Contig

Accession ZDB_216
Length 269970 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2608
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF13458 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0683 Amino acid transport and metabolism (E) E ABC-type branched-chain amino acid transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01999 branched-chain amino acid transport system substrate-binding protein ABC transporters
Quorum sensing		 -

Protein Sequence

MKKTMKMAIIAGAVSCALSAAAYAEDIKVAVVGAMSGPVAQYGDMEFTGARQAVEDINAKGGINGNKLVITEYDDACDPKQAVAVANKVINDGMRYVIGHLCSSSTQPASDIYEDEGILMITPAATNADLTTRGYNLIMRTTGLDSDQGPTAAKYILEKVKPQRIAVVHDKQQYGEGLARSVKDNLNKAGVKEVLFEGVTAGDKDFSALVARLKKDNVDFVYFGGYYPEMGQILRQAKQAGLNIRFMGPEGVGNSSLSNIAGDASEGMLVTLPKRYDQVPANKPVVDALAAKKLDSTGPFVWTTYAALQSLTTAMQRSGSMEPADLAADLKGKPVDTVMGELSWTPNGDLKGFEFGVFEWHKDGTSSPLN

Flanking regions ( +/- flanking 50bp)

CACATGCTGACCGTCCGGTCACTGCAAAGCTAACCGATGGGGATGTTCTGATGAAAAAAACAATGAAAATGGCAATCATTGCCGGAGCTGTATCCTGTGCATTAAGTGCAGCGGCGTACGCTGAAGATATTAAAGTTGCGGTGGTGGGCGCTATGTCCGGACCGGTCGCACAATACGGTGATATGGAATTTACCGGAGCCCGCCAGGCGGTTGAGGACATCAACGCCAAAGGCGGGATTAACGGCAATAAACTGGTGATCACCGAATACGATGACGCCTGTGACCCGAAACAGGCGGTGGCGGTCGCCAACAAAGTGATTAATGACGGCATGCGTTATGTGATCGGGCACCTCTGCTCCTCCTCCACACAACCCGCGTCAGATATTTATGAGGATGAAGGGATCCTGATGATCACCCCGGCGGCAACCAATGCGGACTTAACCACGCGCGGTTACAACCTGATCATGCGTACCACCGGCCTGGATTCTGACCAGGGCCCGACCGCAGCAAAATATATTCTCGAAAAAGTGAAACCGCAGCGCATTGCCGTGGTGCATGACAAACAGCAGTACGGTGAAGGCCTGGCGCGTTCCGTGAAAGACAATCTGAACAAAGCCGGGGTGAAAGAAGTGCTGTTTGAAGGGGTGACGGCGGGTGATAAAGATTTCTCCGCGCTGGTGGCGCGCCTGAAGAAAGATAATGTCGATTTTGTCTATTTCGGCGGCTACTACCCGGAAATGGGACAGATTTTACGCCAGGCAAAACAGGCGGGGCTGAATATCCGCTTTATGGGACCGGAAGGCGTGGGTAACTCCTCACTCTCCAACATTGCCGGTGACGCATCCGAAGGCATGCTGGTGACGCTGCCGAAACGCTATGACCAGGTTCCTGCCAACAAACCGGTGGTGGATGCCCTGGCGGCGAAGAAACTGGATTCCACCGGGCCGTTCGTCTGGACAACCTATGCGGCATTACAGTCCCTGACTACCGCGATGCAGCGCAGCGGCAGCATGGAACCAGCGGATCTGGCCGCTGATCTGAAAGGCAAACCGGTTGACACCGTAATGGGCGAACTGAGCTGGACACCAAACGGGGATCTGAAAGGTTTCGAGTTCGGCGTATTTGAATGGCACAAAGACGGAACCTCATCACCGCTGAACTGATCCGCAGCGGTGACTGATGCGGGCAGTGTGTTTCAGGGGAGTGCGCTATG