Orthogroup:group_2608


Homologs in group_2608

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03480 FBDBKF_03480 Morganella morganii S1 livK ABC-type branched-chain amino acid transport system, periplasmic component
EHELCC_07055 EHELCC_07055 Morganella morganii S2 livK ABC-type branched-chain amino acid transport system, periplasmic component
NLDBIP_07380 NLDBIP_07380 Morganella morganii S4 livK ABC-type branched-chain amino acid transport system, periplasmic component
LHKJJB_06915 LHKJJB_06915 Morganella morganii S3 livK ABC-type branched-chain amino acid transport system, periplasmic component
HKOGLL_04015 HKOGLL_04015 Morganella morganii S5 livK ABC-type branched-chain amino acid transport system, periplasmic component
F4V73_RS11415 F4V73_RS11415 Morganella psychrotolerans - branched-chain amino acid ABC transporter substrate-binding protein

Distribution of group_2608 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2608 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2608

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2608.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 livK 5
2 - 1

Product

# Product Occurence
1 ABC-type branched-chain amino acid transport system, periplasmic component 5
2 branched-chain amino acid ABC transporter substrate-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0683 6 E Amino acid transport and metabolism (E) ABC-type branched-chain amino acid transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01999 6 branched-chain amino acid transport system substrate-binding protein ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13458 6 Periplasmic binding protein

Annotations of the 42 SwissProt hits

Annotation Number of occurrences
Amino acid binding protein 1
Glutamate receptor 3.1 1
Leu/Ile/Val-binding protein 4
Leu/Ile/Val-binding protein BraC3 1
Leu/Ile/Val-binding protein homolog 1 4
Leu/Ile/Val-binding protein homolog 2 4
Leu/Ile/Val-binding protein homolog 3 2
Leu/Ile/Val-binding protein homolog 4 4
Leu/Ile/Val-binding protein homolog 5 4
Leu/Ile/Val-binding protein homolog 6 4
Leu/Ile/Val-binding protein homolog 7 4
Leu/Ile/Val-binding protein homolog 8 4
Leu/Ile/Val/Thr-binding protein 1
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 1
Leucine-specific-binding protein 3

Protein length

Unique protein length 370

Protein length distribution