Homologs in group_438

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00415 FBDBKF_00415 100.0 Morganella morganii S1 tyrP tyrosine transporter TyrP
NLDBIP_02330 NLDBIP_02330 100.0 Morganella morganii S4 tyrP tyrosine transporter TyrP
LHKJJB_03845 LHKJJB_03845 100.0 Morganella morganii S3 tyrP tyrosine transporter TyrP
HKOGLL_03200 HKOGLL_03200 100.0 Morganella morganii S5 tyrP tyrosine transporter TyrP
F4V73_RS06395 F4V73_RS06395 88.7 Morganella psychrotolerans tyrP tyrosine transporter TyrP
PMI_RS08530 PMI_RS08530 64.4 Proteus mirabilis HI4320 tyrP tyrosine transporter TyrP

Distribution of the homologs in the orthogroup group_438

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_438

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAD5 5.82e-170 484 62 3 403 3 tyrP Tyrosine-specific transport system Shigella flexneri
P0AAD4 5.82e-170 484 62 3 403 1 tyrP Tyrosine-specific transport system Escherichia coli (strain K12)
P44727 1.68e-101 309 44 3 399 3 tyrP-A Tyrosine-specific transport system 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44747 4.86e-89 278 44 4 402 3 tyrP-B Tyrosine-specific transport system 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44614 1.48e-63 212 34 4 393 3 mtr Tryptophan-specific transport protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q02DS7 4.96e-63 211 33 2 400 1 mtr Tryptophan-specific transport protein Pseudomonas aeruginosa (strain UCBPP-PA14)
P0AAD3 6.42e-51 179 31 3 384 3 mtr Tryptophan-specific transport protein Shigella flexneri
P0AAD2 6.42e-51 179 31 3 384 1 mtr Tryptophan-specific transport protein Escherichia coli (strain K12)
P23173 2.39e-47 169 30 3 409 1 tnaB Low affinity tryptophan permease Escherichia coli (strain K12)
Q8XB33 3.59e-47 169 30 3 409 3 tnaB Low affinity tryptophan permease Escherichia coli O157:H7
Q5E5M9 5.4e-46 165 31 7 371 3 VF_1172 Glutamine transporter 2 Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q47825 3.1e-42 156 29 6 387 3 tutB Tyrosine permease Enterobacter agglomerans
P28785 2.31e-38 145 28 4 385 2 tnaB Low affinity tryptophan permease Proteus vulgaris

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_01130
Feature type CDS
Gene tyrP
Product tyrosine transporter TyrP
Location 245631 - 246836 (strand: -1)
Length 1206 (nucleotides) / 401 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_438
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03222 Tryptophan/tyrosine permease family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03834 tyrosine-specific transport protein - -

Protein Sequence

MKNRTLGSVLIVAGTTIGAGMLAMPLAAAGIGFPVIAVILIGLWAIMSYTALLMVEVYQYSSPDTGLGSVARQYLGLPGQLLTGFSMLLLMYALTTAYIGGAGEMISASLQNWWQISVTPGTATIIFTLVGGLVVCVGTHSVDFINRILFTGKIIFLIIMLAVMMPHVNMTNLVSMPIQNGLVLSAIPLVFTSFGFHGSVPSLVNYMNGDSKKLRFIFLTGSAIPLVAYLLWQVATLGAIPSDTFFGILAQKSGLDGLLTALSETVANKYVDIAVSLFMDLALATSFLGVALGLFDYLADLFRRKNSAFGRTQTGILTFALPLICALYYKSFTGALAYAAMALSFLALILPSLLAWKVRQNPKAGAYRVAGGNGVLIFIFLFGLLVISIEFIKSAGYLPNI

Flanking regions ( +/- flanking 50bp)

TTCATTACGCTTTGCGCACATATTATTGATTGAAATATCATGAGGTTTTGGTGAAAAATCGTACACTCGGCAGTGTTCTGATTGTTGCGGGAACAACGATCGGTGCCGGTATGCTGGCAATGCCGCTGGCTGCCGCAGGGATCGGATTTCCGGTCATTGCTGTCATTCTGATCGGCCTCTGGGCTATCATGAGCTACACCGCACTGCTGATGGTTGAAGTGTATCAGTACAGCTCACCGGATACCGGCTTAGGCAGCGTCGCCCGTCAATACCTCGGATTACCGGGTCAGCTCCTGACCGGCTTCAGCATGTTGTTGCTGATGTATGCCCTGACCACTGCCTATATCGGCGGAGCCGGGGAAATGATCTCCGCCAGCCTGCAAAACTGGTGGCAAATATCTGTTACACCGGGTACGGCGACCATTATCTTCACCCTCGTTGGCGGCCTGGTAGTGTGTGTCGGGACGCACTCGGTTGATTTTATCAACCGTATCCTGTTCACCGGTAAAATTATCTTCCTGATCATCATGCTCGCCGTCATGATGCCGCATGTGAATATGACCAACCTTGTCAGCATGCCGATTCAGAACGGACTGGTGCTTTCCGCTATCCCGCTGGTGTTTACCTCTTTTGGTTTCCACGGCAGTGTGCCGAGCCTGGTGAATTACATGAACGGCGACAGCAAAAAGCTGCGCTTTATTTTCCTCACTGGTAGTGCTATTCCGCTGGTGGCGTATCTGCTGTGGCAGGTTGCGACCCTCGGCGCGATCCCGTCCGATACCTTCTTTGGTATTCTGGCGCAGAAATCCGGCCTGGACGGCTTACTGACGGCGCTCAGTGAGACCGTGGCCAATAAATATGTGGATATCGCGGTCAGCCTGTTTATGGATCTGGCACTGGCTACCTCATTCCTGGGTGTGGCGCTGGGGTTATTTGATTACCTGGCCGACCTGTTCCGCCGCAAAAATTCCGCCTTCGGCCGTACACAAACCGGGATCCTGACCTTTGCCCTGCCGCTGATTTGCGCCCTGTACTACAAAAGCTTCACCGGTGCGCTGGCGTATGCCGCAATGGCGCTCTCCTTCCTGGCGCTGATCCTGCCGTCATTATTAGCATGGAAAGTACGGCAGAACCCGAAAGCCGGTGCTTACCGTGTTGCAGGCGGAAACGGGGTTCTGATCTTTATCTTCCTGTTCGGCCTGCTGGTGATCTCTATCGAGTTCATCAAAAGCGCCGGTTATCTGCCGAACATTTAATACCATTGTTCTGAAAGCAAGCCCGGATTTCCGGGCTTATTTTTTTTGTC