VFG048624
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG048624, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors
within the database. 1 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.
Description
Protein |
type VI secretion system contractile sheath small subunit VipA |
VF ID |
VF0569 |
Category |
Effector delivery system |
Protein ID |
WP_014229069 |
Characteristics |
Type VI bacterial lipase/phospholipase effectors (Tle) has been sub-divided into Tle1Tle5. The Tle1Tle4 families exhibit the GXSXG motif, while Tle5 present a dual HXKXXXXD motif |
Function |
Antibacterial activity |
Mechanism |
The type VI membrane-targeting phospholipase effector Tle1 and Tli1 immunity proteins play a role in intraspecies antagonism |
Vf_category_id |
VFC0086 |
Occurence in the database
VFG048624 is associated with 1 different proteins (see tab "Protein list" and "Profile") |
The 1 proteins are classified into 1 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_3686 |
F4V73_RS16870 |
203351 |
203848 |
-1 |
tssB |
type VI secretion system contractile sheath small subunit |
Morganella psychrotolerans |