VFG044280


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG044280, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein iron ABC transporter permease
VF ID VF1252
Category Nutritional/Metabolic factor
Protein ID WP_004244967
Vf_category_id VFC0272

Occurence in the database

VFG044280 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_386 FBDBKF_14805 61348 62445 -1 fepD ABC-type Fe3+-siderophore transport system, permease component Morganella morganii S1
1 group_386 EHELCC_15610 91424 92521 -1 fepD ABC-type Fe3+-siderophore transport system, permease component Morganella morganii S2
2 group_386 NLDBIP_16140 91424 92521 -1 fepD ABC-type Fe3+-siderophore transport system, permease component Morganella morganii S4
3 group_386 LHKJJB_15700 24165 25262 1 fepD ABC-type Fe3+-siderophore transport system, permease component Morganella morganii S3
4 group_386 HKOGLL_14820 23377 24474 1 fepD ABC-type Fe3+-siderophore transport system, permease component Morganella morganii S5
5 group_386 F4V73_RS07605 1590829 1591905 -1 iron ABC transporter permease Morganella psychrotolerans
6 group_386 PMI_RS01110 272693 273673 1 iron ABC transporter permease Proteus mirabilis HI4320