PF20404


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF20404, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF20404
Description Family of unknown function (DUF6694)

Occurence in the database

PF20404 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2990 FBDBKF_17195 21822 22100 -1 Lipoprotein Morganella morganii S1
1 group_2990 EHELCC_01695 333401 333679 1 Lipoprotein Morganella morganii S2
2 group_2990 NLDBIP_01765 346457 346735 -1 Lipoprotein Morganella morganii S4
3 group_2990 LHKJJB_00270 45950 46228 1 Lipoprotein Morganella morganii S3
4 group_2990 HKOGLL_00310 51461 51739 1 Lipoprotein Morganella morganii S5
5 group_2990 F4V73_RS05950 1265985 1266263 -1 DUF6694 family lipoprotein Morganella psychrotolerans
6 group_4529 PMI_RS10395 2282029 2282361 -1 hypothetical protein Proteus mirabilis HI4320