Orthogroup:group_2999


Homologs in group_2999

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17470 FBDBKF_17470 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_17365 EHELCC_17365 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_17830 NLDBIP_17830 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_17750 LHKJJB_17750 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_17760 HKOGLL_17760 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS16645 F4V73_RS16645 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of group_2999 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2999 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2999

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2999.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 5
2 - 1

Product

# Product Occurence
1 DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 5
2 TetR/AcrR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 6 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 6 Bacterial regulatory proteins, tetR family

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR 1
HTH-type transcriptional repressor Bm3R1 1
Uncharacterized HTH-type transcriptional regulator YdeS 1
Uncharacterized HTH-type transcriptional regulator YhgD 1

Protein length

Min length 208
Max length 209
Mean length (sd) 208.8 (0.4)
Median length 209.0

Protein length distribution