Homologs in group_2990

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17195 FBDBKF_17195 78.3 Morganella morganii S1 - Lipoprotein
EHELCC_01695 EHELCC_01695 78.3 Morganella morganii S2 - Lipoprotein
NLDBIP_01765 NLDBIP_01765 78.3 Morganella morganii S4 - Lipoprotein
LHKJJB_00270 LHKJJB_00270 78.3 Morganella morganii S3 - Lipoprotein
HKOGLL_00310 HKOGLL_00310 78.3 Morganella morganii S5 - Lipoprotein

Distribution of the homologs in the orthogroup group_2990

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2990

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05950
Feature type CDS
Gene -
Product DUF6694 family lipoprotein
Location 1265985 - 1266263 (strand: -1)
Length 279 (nucleotides) / 92 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2990
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF20404 Family of unknown function (DUF6694)

Protein Sequence

MKKILAVIALSFVLAGCGEATLDMSTQETAKESITTMEKDLSPEDARELKGAITKIGFQAAFASGGDEAKMMAAMKEKLQGKTAKEIIKLAK

Flanking regions ( +/- flanking 50bp)

TATTTGTTTACCGATGTAAAATACCGCAGATTTTATTAATGAGGTGAAAAATGAAAAAAATATTGGCAGTTATTGCACTTTCTTTTGTCCTGGCAGGATGTGGTGAAGCCACGCTGGATATGAGTACACAGGAAACAGCAAAAGAATCAATTACAACAATGGAAAAAGATCTTTCACCTGAAGATGCGCGTGAACTGAAAGGGGCGATTACCAAAATTGGTTTTCAGGCTGCCTTTGCATCGGGTGGTGATGAAGCAAAAATGATGGCCGCGATGAAAGAGAAATTGCAGGGAAAAACAGCAAAAGAAATTATTAAGCTGGCAAAATAATATAGTCGATCCCTCCGGAACACTCTGTACCGGAGAGATCGTCGCAGTAA