PF18312


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF18312, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF18312
Description Copper resistance protein ScsC N-terminal domain

Occurence in the database

PF18312 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1543 FBDBKF_10000 92812 93540 -1 dsbC Protein thiol-disulfide isomerase DsbC Morganella morganii S1
1 group_1543 EHELCC_04800 284777 285505 -1 dsbC Protein thiol-disulfide isomerase DsbC Morganella morganii S2
2 group_1543 NLDBIP_04800 284573 285301 -1 dsbC Protein thiol-disulfide isomerase DsbC Morganella morganii S4
3 group_1543 LHKJJB_13830 50077 50805 1 dsbC Protein thiol-disulfide isomerase DsbC Morganella morganii S3
4 group_1543 HKOGLL_12705 93593 94321 -1 dsbC Protein thiol-disulfide isomerase DsbC Morganella morganii S5
5 group_1543 F4V73_RS00335 78216 78944 1 DsbA family protein Morganella psychrotolerans
6 group_1543 PMI_RS02170 508513 509244 1 DsbA family protein Proteus mirabilis HI4320