PF17283


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17283, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17283
Description SprT-like zinc ribbon domain

Occurence in the database

PF17283 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_884 FBDBKF_04545 104501 105010 1 sprT SprT family zinc-dependent metalloprotease Morganella morganii S1
1 group_884 EHELCC_05835 163958 164467 1 sprT SprT family zinc-dependent metalloprotease Morganella morganii S2
2 group_884 NLDBIP_06155 205023 205532 1 sprT SprT family zinc-dependent metalloprotease Morganella morganii S4
3 group_884 LHKJJB_03035 182547 183056 1 sprT SprT family zinc-dependent metalloprotease Morganella morganii S3
4 group_884 HKOGLL_06510 104411 104920 1 sprT SprT family zinc-dependent metalloprotease Morganella morganii S5
5 group_884 F4V73_RS09000 1879234 1879761 1 SprT family zinc-dependent metalloprotease Morganella psychrotolerans