Orthogroup:group_953


Homologs in group_953

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05200 FBDBKF_05200 Morganella morganii S1 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
EHELCC_12390 EHELCC_12390 Morganella morganii S2 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
NLDBIP_12730 NLDBIP_12730 Morganella morganii S4 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
LHKJJB_12590 LHKJJB_12590 Morganella morganii S3 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
HKOGLL_11205 HKOGLL_11205 Morganella morganii S5 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
F4V73_RS05660 F4V73_RS05660 Morganella psychrotolerans - NirD/YgiW/YdeI family stress tolerance protein
PMI_RS15310 PMI_RS15310 Proteus mirabilis HI4320 - YgiW/YdeI family stress tolerance OB fold protein

Distribution of group_953 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_953 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_953

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_953.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ydeI 5
2 - 2

Product

# Product Occurence
1 putative periplasmic protein YdeI with OB-fold, BOF family 5
2 NirD/YgiW/YdeI family stress tolerance protein 1
3 YgiW/YdeI family stress tolerance OB fold protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3111 7 S Function unknown (S) Predicted periplasmic protein YdeI with OB-fold, BOF family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04076 7 Bacterial OB fold (BOF) protein

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Calcium-regulated OB-fold protein CarO 1
Protein YgiW 2
Uncharacterized protein HI_1709 1
Uncharacterized protein YdeI 1

Protein length

Min length 134
Max length 138
Mean length (sd) 136.7 (1.3)
Median length 137.0

Protein length distribution