PF16527


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16527, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16527
Description Two-component sensor protein CpxA, periplasmic domain

Occurence in the database

PF16527 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1773 FBDBKF_12335 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S1
1 group_1773 EHELCC_13970 3190 4560 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S2
2 group_1773 NLDBIP_15065 7127 8497 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S4
3 group_1773 LHKJJB_15545 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S3
4 group_1773 HKOGLL_14665 116808 118178 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S5
5 group_1773 F4V73_RS17165 64599 65969 1 cpxA envelope stress sensor histidine kinase CpxA Morganella psychrotolerans
6 group_1773 PMI_RS15815 3512374 3513741 -1 cpxA envelope stress sensor histidine kinase CpxA Proteus mirabilis HI4320