PF14532


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF14532
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF14532
Description Sigma-54 interaction domain

Occurence in the database

PF14532 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1494 FBDBKF_09065 28763 30010 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S1
1 group_1494 EHELCC_10345 116094 117341 1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S2
2 group_1494 NLDBIP_10690 94365 95612 1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S4
3 group_1494 LHKJJB_10665 95916 97163 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S3
4 group_1494 HKOGLL_13725 29217 30464 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S5
5 group_1494 F4V73_RS10880 314778 316028 1 sigma-54 dependent transcriptional regulator Morganella psychrotolerans
6 group_1494 PMI_RS11900 2627627 2628904 -1 sigma-54 dependent transcriptional regulator Proteus mirabilis HI4320